RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	CYP2C9	P11712	490 aa		13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	PURA	Q00577	322 aa	Known RBP	13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	SLC35G1	Q2M3R5	365 aa		13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	TMEM199	Q8N511	208 aa		13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	SCLY	Q96I15	445 aa		13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	KRT23	Q9C075	422 aa		13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CTNNA3	Q9UI47	895 aa		13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CHD7	Q9P2D1	2997 aa		13.43	□□□□□ -0.26
TUBA1B-208	ENST00000552984	RAD50	Q92878	1312 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	LOC102724159	A0A0B4J2E5	919 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	OPLAH	O14841	1288 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CYP21A2	P08686	494 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	TXN	P10599	105 aa	Known RBP	13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CHML	P26374	656 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	GRIN2C	Q14957	1233 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	PWP2	Q15269	919 aa	Known RBP	13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CCDC178	Q5BJE1	867 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	IFIT1B	Q5T764	474 aa	Known RBP	13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	RASIP1	Q5U651	963 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	STOX1	Q6ZVD7	989 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CHST3	Q7LGC8	479 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	DNER	Q8NFT8	737 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	MAFA	Q8NHW3	353 aa	Predicted RBP	13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	SCFD2	Q8WU76	684 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	VWCE	Q96DN2	955 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	PBX4	Q9BYU1	374 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CNNM2	Q9H8M5	875 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	IL23A	Q9NPF7	189 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	PNMA2	Q9UL42	364 aa		13.42	□□□□□ -0.26
TUBA1B-208	ENST00000552984	FOSL2	P15408	326 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	EIF2AK2	P19525	551 aa	Known RBP	13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CPT1A	P50416	773 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CHMP4BP1	P59074	171 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	NBPF20	Q3BBV1	942 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	FAM47C	Q5HY64	1035 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	SEPT14	Q6ZU15	432 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	OTOP2	Q7RTS6	562 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	FBXO11	Q86XK2	927 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	TIFA	Q96CG3	184 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	MTG1	Q9BT17	334 aa	Predicted RBP	13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	POLR3E	Q9NVU0	708 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	MAD2L2	Q9UI95	211 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	REV3L	O60673	3130 aa		13.41	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CFB	P00751	764 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	LY6K	Q17RY6	165 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	CCDC62	Q6P9F0	684 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	SKAP1	Q86WV1	359 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	HOMER1	Q86YM7	354 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	USP38	Q8NB14	1042 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	RGS22	Q8NE09	1264 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	RMDN3	Q96TC7	470 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	ZNF576	Q9H609	170 aa		13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984	COL4A4	P53420	1690 aa	Predicted RBP	13.4	□□□□□ -0.26
TUBA1B-208	ENST00000552984		A6NJR5	290 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	KLRF2	D3W0D1	207 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	SORBS3	O60504	671 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	HOXA13	P31271	388 aa	Predicted RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NT5C2	P49902	561 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ARHGAP1	Q07960	439 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	COL9A3	Q14050	684 aa	Predicted RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TTLL4	Q14679	1199 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	IL31RA	Q8NI17	732 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NSUN6	Q8TEA1	469 aa	Known RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	AFG1L	Q8WV93	481 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	HERVK_113	Q902F9	699 aa		13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ZFP91	Q96JP5	570 aa	Predicted RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MPHOSPH6	Q99547	160 aa	Known RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	GPHN	Q9NQX3	736 aa	Predicted RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	YBX2	Q9Y2T7	364 aa	Known RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MRPL11	Q9Y3B7	192 aa	Known RBP	13.39	□□□□□ -0.27
TUBA1B-208	ENST00000552984	TMEM265	A0A087WTH1	108 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PALM3	A6NDB9	673 aa	Predicted RBP	13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984		E7EWF7	191 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	IFIT3	O14879	490 aa	Known RBP	13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NKRF	O15226	690 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	SGSM2	O43147	1006 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	FGB	P02675	491 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MMP3	P08254	477 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MYOG	P15173	224 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	HSD17B4	P51659	736 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	RABGGTB	P53611	331 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ANTXR2	P58335	489 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	GRM4	Q14833	912 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	ARHGEF16	Q5VV41	709 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	DEFB128	Q7Z7B8	93 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MCF2L2	Q86YR7	1114 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PIBF1	Q8WXW3	757 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	MTMR8	Q96EF0	704 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PIGS	Q96S52	555 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	AMN	Q9BXJ7	453 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	NKX2-4	Q9H2Z4	354 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PRDM12	Q9H4Q4	367 aa		13.38	□□□□□ -0.27
TUBA1B-208	ENST00000552984	PXMP2	Q9NR77	195 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms