RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, human

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGFBR1-209	ENST00000552516	GSPT2	Q8IYD1	628 aa	Known RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	FAM133A	Q8N9E0	248 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	TBC1D5	Q92609	795 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	NAPG	Q99747	312 aa	Predicted RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ZNF577	Q9BSK1	485 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	COA1	Q9GZY4	146 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	TMOD4	Q9NZQ9	345 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	FBXO2	Q9UK22	296 aa	Predicted RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PPM1K	Q8N3J5	372 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	OR8K1	Q8NGG5	319 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	NOP56	O00567	594 aa	Known RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ETF1	P62495	437 aa	Known RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	SLC7A5	Q01650	507 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	FBXO33	Q7Z6M2	555 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	KRT222	Q8N1A0	295 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	RIOK1	Q9BRS2	568 aa	Known RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	TFRC	P02786	760 aa	Known RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	TNNI1	P19237	187 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	STAT2	P52630	851 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	KRT83	P78385	493 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PSMD1	Q99460	953 aa		11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.93	□□□□□ -0.5
TGFBR1-209	ENST00000552516	EHHADH	Q08426	723 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	DGKZ	Q13574	1117 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	SGMS1	Q86VZ5	419 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	RSPH14	Q9UHP6	348 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	WNT7A	O00755	349 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	TROAP	Q12815	778 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	BMS1	Q14692	1282 aa	Known RBP	11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	RNF187	Q5TA31	235 aa	Predicted RBP	11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	DYDC1	Q8WWB3	177 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ANO3	Q9BYT9	981 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	LRP10	Q7Z4F1	713 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PRMT6	Q96LA8	375 aa	Predicted RBP	11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PCDHA6	Q9UN73	950 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PCDHA8	Q9Y5H6	950 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ZHX2	Q9Y6X8	837 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	FAM205A	Q6ZU69	1335 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	LRRIQ4	A6NIV6	560 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	FGFR2	P21802	821 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PPP2R5B	Q15173	497 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ACER1	Q8TDN7	264 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	FNBP1	Q96RU3	617 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	IRX3	P78415	501 aa	Predicted RBP	11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	SYDE2	Q5VT97	1194 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	DGKH	Q86XP1	1220 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	RABGAP1	Q9Y3P9	1069 aa		11.92	□□□□□ -0.5
TGFBR1-209	ENST00000552516	LONP1	P36776	959 aa	Known RBP	11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ADCY1	Q08828	1119 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	IQCB1	Q15051	598 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ASIC2	Q16515	512 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	RNF169	Q8NCN4	708 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	SECISBP2L	Q93073	1101 aa	Known RBP	11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CHP1	Q99653	195 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	STXBP4	Q6ZWJ1	553 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	LRRC27	Q9C0I9	530 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ZBED4	O75132	1171 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	MOCS3	O95396	460 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PLA2G4B	P0C869	781 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	NLRX1	Q86UT6	975 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	APOL6	Q9BWW8	343 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ST7	Q9NRC1	585 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	SMARCAL1	Q9NZC9	954 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ADAMTS1	Q9UHI8	967 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	TCRBV5S4A2T	A0A5A2	114 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	GOLGA6L9	A6NEM1	432 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ANKRD65	E5RJM6	399 aa		11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.91	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ERLIN2	O94905	339 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	XRCC5	P13010	732 aa	Known RBP	11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	TNFAIP3	P21580	790 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	STK4	Q13043	487 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	KIAA0753	Q2KHM9	967 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	P2RX5	Q93086	422 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	WRNIP1	Q96S55	665 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CTTNBP2NL	Q9P2B4	639 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PEAK1	Q9H792	1746 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	DDTL	A6NHG4	134 aa	Predicted RBP	11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	PNMA6A	P0CW24	399 aa	Predicted RBP	11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CD19	P15391	556 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CA8	P35219	290 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	NF2	P35240	595 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	DDR1	Q08345	913 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	ZNF394	Q53GI3	561 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CHURC1	Q8WUH1	139 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	SPOP	O43791	374 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	IQCE	Q6IPM2	695 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	GSDMA	Q96QA5	445 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	LZTS2	Q9BRK4	669 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	GOLPH3	Q9H4A6	298 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	RERE	Q9P2R6	1566 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CAPN2	P17655	700 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	SMC1A	Q14683	1233 aa	Known RBP	11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	MTERF2	Q49AM1	385 aa		11.9	□□□□□ -0.5
TGFBR1-209	ENST00000552516	CYFIP1	Q7L576	1253 aa		11.9	□□□□□ -0.5

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