RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
LETMD1-221ENST00000550100 LOC102724159A0A0B4J2E5 919 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 MOXD2PA6NHM9 499 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 PQBP1O60828 265 aaKnown RBP13.69□□□□□ -0.22
LETMD1-221ENST00000550100 RGS20O76081 388 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
LETMD1-221ENST00000550100 HSPA4P34932 840 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 PSMC6P62333 389 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 PWP2Q15269 919 aaKnown RBP13.69□□□□□ -0.22
LETMD1-221ENST00000550100 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
LETMD1-221ENST00000550100 MCF2L2Q86YR7 1114 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 STARD7Q9NQZ5 370 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 Q9Y3F1 56 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 LTBP2Q14767 1821 aa13.69□□□□□ -0.22
LETMD1-221ENST00000550100 CCDC69A6NI79 296 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 FUT2Q10981 343 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 LY6KQ17RY6 165 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 RNF20Q5VTR2 975 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 SEPT14Q6ZU15 432 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 ANKRD33Q7Z3H0 272 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 FANCBQ8NB91 859 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 NSUN6Q8TEA1 469 aaKnown RBP13.68□□□□□ -0.22
LETMD1-221ENST00000550100 BADQ92934 168 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 AP5M1Q9H0R1 490 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 PRDM5Q9NQX1 630 aaPredicted RBP13.68□□□□□ -0.22
LETMD1-221ENST00000550100 SLC12A7Q9Y666 1083 aa13.68□□□□□ -0.22
LETMD1-221ENST00000550100 NR3C2P08235 984 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 EPHB4P54760 987 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 APOA5Q6Q788 366 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 SLC43A3Q8NBI5 491 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 PCSK9Q8NBP7 692 aaKnown RBP13.67□□□□□ -0.22
LETMD1-221ENST00000550100 CTCFLQ8NI51 663 aaPredicted RBP13.67□□□□□ -0.22
LETMD1-221ENST00000550100 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.22
LETMD1-221ENST00000550100 VTI1AQ96AJ9 217 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 PDCD2LQ9BRP1 358 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 MAF1Q9H063 256 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 SPC25Q9HBM1 224 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 ELP1O95163 1332 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 ARVCFO00192 962 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 TXNP10599 105 aaKnown RBP13.67□□□□□ -0.22
LETMD1-221ENST00000550100 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 CDC27P30260 824 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 FCHSD1Q86WN1 690 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 OR6J1Q8NGC5 347 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 SCFD2Q8WU76 684 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 GLT1D1Q96MS3 346 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
LETMD1-221ENST00000550100 IWS1Q96ST2 819 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
LETMD1-221ENST00000550100 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
LETMD1-221ENST00000550100 MEIS2O14770 477 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 CD4P01730 458 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 CLTBP09497 229 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 KIF5BP33176 963 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 SP2Q02086 613 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 ARHGAP1Q07960 439 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 APOBRQ0VD83 1088 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 PGM5Q15124 567 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 STXBP2Q15833 593 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 C9orf50Q5SZB4 431 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 VSIG10LQ86VR7 867 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 FAM126BQ8IXS8 530 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
LETMD1-221ENST00000550100 TOX2Q96NM4 488 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 TRPV6Q9H1D0 765 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 TBX21Q9UL17 535 aa13.66□□□□□ -0.22
LETMD1-221ENST00000550100 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.22
LETMD1-221ENST00000550100 A6NJR5 290 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
LETMD1-221ENST00000550100 ADAMTS3O15072 1205 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 POLR2MP0CAP2 368 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
LETMD1-221ENST00000550100 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
LETMD1-221ENST00000550100 PURAQ00577 322 aaKnown RBP13.65□□□□□ -0.22
LETMD1-221ENST00000550100 ITGA7Q13683 1181 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 PPP2R5BQ15173 497 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 ERICH6BQ5W0A0 696 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 Q6ZUG5 572 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 AFG1LQ8WV93 481 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 LZTS2Q9BRK4 669 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
LETMD1-221ENST00000550100 TELO2Q9Y4R8 837 aa13.65□□□□□ -0.22
LETMD1-221ENST00000550100 MYH7BA7E2Y1 1941 aa13.64□□□□□ -0.23
LETMD1-221ENST00000550100 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
LETMD1-221ENST00000550100 KLF18A0A0U1RQI7 1052 aa13.64□□□□□ -0.23
LETMD1-221ENST00000550100 SORBS3O60504 671 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms