RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 IKQ13123 557 aaPredicted RBP18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 SART3Q15020 963 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 RASGRP2Q7LDG7 609 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 FAM133AQ8N9E0 248 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 TSPYL2Q9H2G4 693 aaPredicted RBP18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 PCDHA11Q9Y5I1 949 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 IFIT3O14879 490 aaKnown RBP18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 CABYRO75952 493 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 POU3F3P20264 500 aaPredicted RBP18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 KCNQ1P51787 676 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 CCL23P55773 120 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 ANTXR2P58335 489 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 CNTN2Q02246 1040 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 TNFAIP2Q03169 654 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 ITGA7Q13683 1181 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 GPATCH4Q5T3I0 446 aaKnown RBP18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 TTBK2Q6IQ55 1244 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 IGDCC4Q8TDY8 1250 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 TRPV6Q9H1D0 765 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 PRR12Q9ULL5 1215 aa18.34■□□□□ 0.53
CHMP1A-206ENST00000549139 FRMPD2Q68DX3 1309 aaPredicted RBP18.33■□□□□ 0.53
CHMP1A-206ENST00000549139 PTGS1P23219 599 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 MCM5P33992 734 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 PPP2R2DQ66LE6 453 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 CHST3Q7LGC8 479 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 KCNB2Q92953 911 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 AGBL1Q96MI9 1066 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 SEZ6LQ9BYH1 1024 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 GPCPD1Q9NPB8 672 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.52
CHMP1A-206ENST00000549139 LRRC37A2A6NM11 1700 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 B4GALT4O60513 344 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 HSPA4P34932 840 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 SLC16A2P36021 539 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 WTAPQ15007 396 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 FSCN1Q16658 493 aaKnown RBP18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 TLK2Q86UE8 772 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 MICALL1Q8N3F8 863 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 TMEM87BQ96K49 555 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 ARIH1Q9Y4X5 557 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 MTCH2Q9Y6C9 303 aa18.32■□□□□ 0.52
CHMP1A-206ENST00000549139 ZNF536O15090 1300 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 SMPD1P17405 629 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 KRT32Q14532 448 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 AAK1Q2M2I8 961 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 ASPRV1Q53RT3 343 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 TMEM67Q5HYA8 995 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 RPUSD2Q8IZ73 545 aaKnown RBP18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 TMTC2Q8N394 836 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 SCLYQ96I15 445 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 NEK1Q96PY6 1258 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 RANBP17Q9H2T7 1088 aaKnown RBP18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 EPHX3Q9H6B9 360 aa18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 A1CFQ9NQ94 594 aaKnown RBP18.31■□□□□ 0.52
CHMP1A-206ENST00000549139 RFXAPO00287 272 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 PRC1O43663 620 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 PARP1P09874 1014 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 GOLGA8HP0CJ92 632 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 PSMC6P62333 389 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 TTLL4Q14679 1199 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 TKFCQ3LXA3 575 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 TMEM63BQ5T3F8 832 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 LRFN3Q9BTN0 628 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 ACAD9Q9H845 621 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 HOMER2Q9NSB8 354 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 SCN5AQ14524 2016 aa18.3■□□□□ 0.52
CHMP1A-206ENST00000549139 ASB14A6NK59 587 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 DYNC1LI2O43237 492 aaPredicted RBP18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 ATP2A2P16615 1042 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 TAPT1Q6NXT6 567 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 USP26Q9BXU7 913 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 LY9Q9HBG7 655 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 SENP2Q9HC62 589 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 PNMA2Q9UL42 364 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 Q9Y3F1 56 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 TET1Q8NFU7 2136 aa18.29■□□□□ 0.52
CHMP1A-206ENST00000549139 WDR19Q8NEZ3 1342 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 LCTP09848 1927 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 PALM3A6NDB9 673 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 EPOPA6NHQ4 379 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 ICAM1P05362 532 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 LIFRP42702 1097 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 SNAP25P60880 206 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 EXOSC10Q01780 885 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 TROAPQ12815 778 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 COL9A3Q14050 684 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 ADCK5Q3MIX3 580 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 DHX32Q7L7V1 743 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 UBA5Q9GZZ9 404 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 AP5M1Q9H0R1 490 aa18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 ALDH8A1Q9H2A2 487 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-206ENST00000549139 ZBBXA8MT70 800 aa18.27■□□□□ 0.52
CHMP1A-206ENST00000549139 SH2B2O14492 632 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms