RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 K7ESM1 405 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 NOBOXO60393 691 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 FUCA1P04066 466 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 NASPP49321 788 aaPredicted RBP6.88□□□□□ -1.31
CNOT2-216ENST00000548939 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
CNOT2-216ENST00000548939 MFAP1P55081 439 aaKnown RBP6.88□□□□□ -1.31
CNOT2-216ENST00000548939 VHLLQ6RSH7 139 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 DDX1Q92499 740 aaKnown RBP6.88□□□□□ -1.31
CNOT2-216ENST00000548939 ZBTB8AQ96BR9 441 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 SHDQ96IW2 340 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 NTMQ9P121 344 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 CLEC1BQ9P126 229 aa6.88□□□□□ -1.31
CNOT2-216ENST00000548939 CNOT11Q9UKZ1 510 aaKnown RBP6.88□□□□□ -1.31
CNOT2-216ENST00000548939 NTRK1P04629 796 aa6.87□□□□□ -1.31
CNOT2-216ENST00000548939 TTLL7Q6ZT98 887 aa6.87□□□□□ -1.31
CNOT2-216ENST00000548939 SPATA6Q9NWH7 488 aaPredicted RBP6.87□□□□□ -1.31
CNOT2-216ENST00000548939 APEX2Q9UBZ4 518 aa6.87□□□□□ -1.31
CNOT2-216ENST00000548939 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
CNOT2-216ENST00000548939 SIT1Q9Y3P8 196 aa6.87□□□□□ -1.31
CNOT2-216ENST00000548939 KCNH1O95259 989 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 CYP2C8P10632 490 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 PLS3P13797 630 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 CNR2P34972 360 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 CASP7P55210 303 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 POMZP3Q6PJE2 187 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 HHIPL2Q6UWX4 724 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 CRACR2BQ8N4Y2 399 aaPredicted RBP6.86□□□□□ -1.31
CNOT2-216ENST00000548939 ZNF513Q8N8E2 541 aaPredicted RBP6.86□□□□□ -1.31
CNOT2-216ENST00000548939 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 APBA2Q99767 749 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 LNPKQ9C0E8 428 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 EMC9Q9Y3B6 208 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 DUSP10Q9Y6W6 482 aa6.86□□□□□ -1.31
CNOT2-216ENST00000548939 SMARCA5O60264 1052 aaPredicted RBP6.85□□□□□ -1.31
CNOT2-216ENST00000548939 GJA8P48165 433 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 SCRN1Q12765 414 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 SMAD4Q13485 552 aaKnown RBP6.85□□□□□ -1.31
CNOT2-216ENST00000548939 ZNF827Q17R98 1081 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 ZXDCQ2QGD7 858 aaPredicted RBP6.85□□□□□ -1.31
CNOT2-216ENST00000548939 ZNF761Q86XN6 746 aaPredicted RBP6.85□□□□□ -1.31
CNOT2-216ENST00000548939 NT5DC4Q86YG4 428 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 DCP2Q8IU60 420 aaKnown RBP6.85□□□□□ -1.31
CNOT2-216ENST00000548939 BVESQ8NE79 360 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 COPS5Q92905 334 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 MMP19Q99542 508 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 GPRC5CQ9NQ84 441 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 MARCH2Q9P0N8 246 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 PALD1Q9ULE6 856 aa6.85□□□□□ -1.31
CNOT2-216ENST00000548939 NOP56O00567 594 aaKnown RBP6.84□□□□□ -1.31
CNOT2-216ENST00000548939 C8BP07358 591 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 NAT2P11245 290 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 C9orf131Q5VYM1 1079 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 MBLAC2Q68D91 279 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 LINC00482Q8N8I6 264 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 PLEKHO2Q8TD55 490 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 GPR20Q99678 358 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 AP5M1Q9H0R1 490 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 BTG4Q9NY30 223 aa6.84□□□□□ -1.31
CNOT2-216ENST00000548939 INSRRP14616 1297 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 HDLBPQ00341 1268 aaKnown RBP6.83□□□□□ -1.32
CNOT2-216ENST00000548939 ETV3LQ6ZN32 361 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 ADAMTS17Q8TE56 1095 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 DPF3Q92784 378 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 PPP1R14AQ96A00 147 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 SEC16BQ96JE7 1060 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 GORASP1Q9BQQ3 440 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 PCDH18Q9HCL0 1135 aa6.83□□□□□ -1.32
CNOT2-216ENST00000548939 THBDP07204 575 aa6.82□□□□□ -1.32
CNOT2-216ENST00000548939 ZNF143P52747 638 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-216ENST00000548939 GTF2IRD2BQ6EKJ0 949 aa6.82□□□□□ -1.32
CNOT2-216ENST00000548939 GTF2IRD2Q86UP8 949 aa6.82□□□□□ -1.32
CNOT2-216ENST00000548939 TEX2Q8IWB9 1127 aa6.82□□□□□ -1.32
CNOT2-216ENST00000548939 C22orf46C9J442 243 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 SGSM2O43147 1006 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 ITGB3P05106 788 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 THBS2P35442 1172 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 MAGEA10P43363 369 aaPredicted RBP6.81□□□□□ -1.32
CNOT2-216ENST00000548939 NCAPHQ15003 741 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 CD300LDQ6UXZ3 194 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 TRIM59Q8IWR1 403 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 SEC14L1Q92503 715 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 SYT3Q9BQG1 590 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 C11orf84Q9BUA3 381 aaPredicted RBP6.81□□□□□ -1.32
CNOT2-216ENST00000548939 CYP26B1Q9NR63 512 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 STRIP2Q9ULQ0 834 aa6.81□□□□□ -1.32
CNOT2-216ENST00000548939 PUM1Q14671 1186 aaKnown RBP eCLIP6.8□□□□□ -1.32
CNOT2-216ENST00000548939 INF2Q27J81 1249 aa6.8□□□□□ -1.32
CNOT2-216ENST00000548939 ZC3H18Q86VM9 953 aaKnown RBP6.8□□□□□ -1.32
CNOT2-216ENST00000548939 MIB1Q86YT6 1006 aa6.8□□□□□ -1.32
CNOT2-216ENST00000548939 FAM26EQ8N5C1 309 aa6.8□□□□□ -1.32
CNOT2-216ENST00000548939 KYQ8NBH2 561 aa6.8□□□□□ -1.32
CNOT2-216ENST00000548939 ANAPC16Q96DE5 110 aa6.8□□□□□ -1.32
CNOT2-216ENST00000548939 NKX2-4Q9H2Z4 354 aa6.8□□□□□ -1.32
CNOT2-216ENST00000548939 MYRFQ9Y2G1 1151 aa6.8□□□□□ -1.32
CNOT2-216ENST00000548939 RPL13P26373 211 aaKnown RBP6.79□□□□□ -1.32
CNOT2-216ENST00000548939 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 TTLL6Q8N841 843 aa6.79□□□□□ -1.32
CNOT2-216ENST00000548939 FRS2Q8WU20 508 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms