RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-215ENST00000547672 MYPNQ86TC9 1320 aa15.14■□□□□ 0.01
PTCH1-215ENST00000547672 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 BIN1O00499 593 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 CFBP00751 764 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 YBX3P16989 372 aaKnown RBP eCLIP15.13■□□□□ 0.01
PTCH1-215ENST00000547672 AFMP43652 599 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 MYL5Q02045 173 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 DPYDQ12882 1025 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 STIM1Q13586 685 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 MTMR2Q13614 643 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 MORC3Q14149 939 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 DOCK1Q14185 1865 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 COG2Q14746 738 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 PDXDC2PQ6P474 469 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 KRT26Q7Z3Y9 468 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 SLC38A10Q9HBR0 1119 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 BMP2KQ9NSY1 1161 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-215ENST00000547672 EMILIN3Q9NT22 766 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 MAN1B1Q9UKM7 699 aa15.13■□□□□ 0.01
PTCH1-215ENST00000547672 GLTPD2A6NH11 291 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 CBFA2T2O43439 604 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 TDP2O95551 362 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 VCAM1P19320 739 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 CDC25BP30305 580 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 GHRHRQ02643 423 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 KCNB1Q14721 858 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 DPCR1Q3MIW9 517 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 SH3D19Q5HYK7 790 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 HAUS3Q68CZ6 603 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 C11orf57Q6ZUT1 292 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-215ENST00000547672 SV2BQ7L1I2 683 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 AOPEPQ8N6M6 819 aa15.12■□□□□ 0.01
PTCH1-215ENST00000547672 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTCH1-215ENST00000547672 RPAP3Q9H6T3 665 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-215ENST00000547672 USP2O75604 605 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-215ENST00000547672 EPHX2P34913 555 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 HSD17B4P51659 736 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 SNAP25P60880 206 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 SETQ01105 290 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-215ENST00000547672 KARSQ15046 597 aaKnown RBP15.11■□□□□ 0.01
PTCH1-215ENST00000547672 XRRA1Q6P2D8 792 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 NIPA1Q7RTP0 329 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 DHX40Q8IX18 779 aaKnown RBP15.11■□□□□ 0.01
PTCH1-215ENST00000547672 ENOX1Q8TC92 643 aaKnown RBP15.11■□□□□ 0.01
PTCH1-215ENST00000547672 CRYGNQ8WXF5 182 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 ZKSCAN4Q969J2 545 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-215ENST00000547672 MRFAP1L1Q96HT8 127 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 GLIS2Q9BZE0 524 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-215ENST00000547672 KCNMB3Q9NPA1 279 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 KBTBD4Q9NVX7 518 aa15.11■□□□□ 0.01
PTCH1-215ENST00000547672 A0A087X0B3 334 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 SLC37A4O43826 429 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 RPN1P04843 607 aaKnown RBP15.1■□□□□ 0.01
PTCH1-215ENST00000547672 MUTP22033 750 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-215ENST00000547672 ARMC9Q7Z3E5 817 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 FCHSD1Q86WN1 690 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 DRC7Q8IY82 874 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 ANKRD13AQ8IZ07 590 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 ERCC4Q92889 916 aaPredicted RBP15.1■□□□□ 0.01
PTCH1-215ENST00000547672 C7orf25Q9BPX7 421 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
PTCH1-215ENST00000547672 AFG3L2Q9Y4W6 797 aa15.1■□□□□ 0.01
PTCH1-215ENST00000547672 PVALEFA0A1B0GWK0 134 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 VWA5AO00534 786 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 CXCL11O14625 94 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 ATP2A1O14983 1001 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 DSG3P32926 999 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 ZNF75DP51815 510 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 PPATQ06203 517 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 PRR16Q569H4 304 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 HYIQ5T013 277 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 CNNM4Q6P4Q7 775 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-215ENST00000547672 CATSPERGQ6ZRH7 1159 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 MB21D1Q8N884 522 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 SNX29Q8TEQ0 813 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 WDR11Q9BZH6 1224 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 FBXO28Q9NVF7 368 aa15.09■□□□□ 0.01
PTCH1-215ENST00000547672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.08■□□□□ 0
PTCH1-215ENST00000547672 OPLAHO14841 1288 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 ALAS1P13196 640 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 PLCG1P19174 1290 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 HOXA13P31271 388 aaPredicted RBP15.08■□□□□ 0
PTCH1-215ENST00000547672 PSMD2Q13200 908 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 PABPC4Q13310 644 aaKnown RBP eCLIP15.08■□□□□ 0
PTCH1-215ENST00000547672 PLA2G4DQ86XP0 818 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 ERO1BQ86YB8 467 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 ANKRD20A12PQ8NF67 263 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 HAS1Q92839 578 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 ADAMTS5Q9UNA0 930 aa15.08■□□□□ 0
PTCH1-215ENST00000547672 MYH7BA7E2Y1 1941 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 FOXN1O15353 648 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 EDIL3O43854 480 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 PRR29P0C7W0 189 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 BCRP11274 1271 aa15.07■□□□□ 0
PTCH1-215ENST00000547672 CDK11BP21127 795 aaKnown RBP15.07■□□□□ 0
PTCH1-215ENST00000547672 MSNP26038 577 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms