RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 TRIM11Q96F44 468 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 NLRP1Q9C000 1473 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 DISC1Q9NRI5 854 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 HLA-DPA1P20036 260 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SOX5P35711 763 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 NEK2P51955 445 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 MFAP3P55082 362 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 PRKG1Q13976 671 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 OTUD7BQ6GQQ9 843 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 TRIM67Q6ZTA4 783 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SLC12A6Q9UHW9 1150 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SNX14Q9Y5W7 946 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 ZFXP17010 805 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 NCF2P19878 526 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 KRT33BQ14525 404 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 AOC3Q16853 763 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 MID2Q9UJV3 735 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 CDV3Q9UKY7 258 aaKnown RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 CFLARO15519 480 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 GPAA1O43292 621 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 H2AFZP0C0S5 128 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 MYL7Q01449 175 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 ACBD5Q5T8D3 534 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-204ENST00000544246 H2AFVQ71UI9 128 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 STAMQ92783 540 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 PHKBQ93100 1093 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 ZBTB18Q99592 522 aa11.28□□□□□ -0.6
PCDH9-204ENST00000544246 PRDM1O75626 825 aa11.27□□□□□ -0.6
PCDH9-204ENST00000544246 OCM2P0CE71 109 aa11.27□□□□□ -0.6
PCDH9-204ENST00000544246 OCMP0CE72 109 aaPredicted RBP11.27□□□□□ -0.6
PCDH9-204ENST00000544246 PDE6BP35913 854 aa11.27□□□□□ -0.6
PCDH9-204ENST00000544246 ARMCX5Q6P1M9 558 aa11.27□□□□□ -0.6
PCDH9-204ENST00000544246 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.6
PCDH9-204ENST00000544246 XAGE2Q96GT9 111 aa11.27□□□□□ -0.6
PCDH9-204ENST00000544246 METTL14Q9HCE5 456 aaKnown RBP11.27□□□□□ -0.6
PCDH9-204ENST00000544246 BPIFB4P59827 614 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 FOXD4Q12950 439 aaPredicted RBP11.27□□□□□ -0.61
PCDH9-204ENST00000544246 TMEM259Q4ZIN3 620 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 METTL23Q86XA0 190 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.27□□□□□ -0.61
PCDH9-204ENST00000544246 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 NCLNQ969V3 563 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 TTC25Q96NG3 672 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 DESI2Q9BSY9 194 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 HAUS4Q9H6D7 363 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 PDE11AQ9HCR9 933 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.61
PCDH9-204ENST00000544246 PCYT1AP49585 367 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 MYL10Q9BUA6 226 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 TEKT3Q9BXF9 490 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 CPSF3Q9UKF6 684 aaKnown RBP11.27□□□□□ -0.61
PCDH9-204ENST00000544246 PCDHB4Q9Y5E5 795 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 KDM5DQ9BY66 1539 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 SYCE1LA8MT33 242 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 MT-ND3P03897 115 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 KCTD16Q68DU8 428 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 DNAAF3Q8N9W5 541 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 LZICQ8WZA0 190 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 MCF2LO15068 1137 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 GNPATO15228 680 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.61
PCDH9-204ENST00000544246 KRT8P05787 483 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 PTK2Q05397 1052 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 TFDP1Q14186 410 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 FAM160B1Q5W0V3 765 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 CEP70Q8NHQ1 597 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 CHURC1Q8WUH1 139 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 SLC38A10Q9HBR0 1119 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 FGFR1OP2Q9NVK5 253 aa11.27□□□□□ -0.61
PCDH9-204ENST00000544246 ZKSCAN8Q15776 578 aaPredicted RBP11.26□□□□□ -0.61
PCDH9-204ENST00000544246 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 KLC3Q6P597 504 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 CFAP36Q96G28 342 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 CHCHD3Q9NX63 227 aaKnown RBP11.26□□□□□ -0.61
PCDH9-204ENST00000544246 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 EYA2O00167 538 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 SORBS3O60504 671 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 NAA35Q5VZE5 725 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 CCNYQ8ND76 341 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 RPRD2Q5VT52 1461 aaKnown RBP11.26□□□□□ -0.61
PCDH9-204ENST00000544246 LMNAP02545 664 aaKnown RBP11.26□□□□□ -0.61
PCDH9-204ENST00000544246 TMOD1P28289 359 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 TCP11X2Q5H9J9 407 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 DACH2Q96NX9 599 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 VPS54Q9P1Q0 977 aa11.26□□□□□ -0.61
PCDH9-204ENST00000544246 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms