RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 UBXN2AP68543 259 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 ORC2Q13416 577 aaPredicted RBP19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 MCM6Q14566 821 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 PRR16Q569H4 304 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 ARMCX5Q6P1M9 558 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 ZKSCAN4Q969J2 545 aaPredicted RBP19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 SYNPO2Q9UMS6 1093 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 CDK11BP21127 795 aaKnown RBP19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 SNX29Q8TEQ0 813 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 LENG9Q96B70 501 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
TMEM50B-210ENST00000542230 TRIM49BA6NDI0 452 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 MARCH6O60337 910 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 MMP14P50281 582 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 PMS1P54277 932 aaKnown RBP19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 TNFAIP1Q13829 316 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 ZNF658Q5TYW1 1059 aaPredicted RBP19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 AGBL1Q96MI9 1066 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 FHDC1Q9C0D6 1143 aaPredicted RBP19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 RANBP17Q9H2T7 1088 aaKnown RBP19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 PCDHA12Q9UN75 941 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 TPM3P06753 285 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 TMEM266Q2M3C6 531 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 APTXQ7Z2E3 356 aaKnown RBP19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 EEF2KMTQ96G04 330 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 KCNMB3Q9NPA1 279 aa19.4■□□□□ 0.7
TMEM50B-210ENST00000542230 SPDYE3A6NKU9 549 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 OFD1O75665 1012 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 FCER1AP12319 257 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 USP11P51784 963 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 PDIA5Q14554 519 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 SPATA1Q5VX52 437 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 CALML4Q96GE6 196 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 ATAD5Q96QE3 1844 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 MYMKA6NI61 221 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 CCZ1BP86790 482 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 CCZ1P86791 482 aaPredicted RBP19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 CHURC1Q8WUH1 139 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 NELFBQ8WX92 580 aa19.39■□□□□ 0.69
TMEM50B-210ENST00000542230 CYP3A7-CYP3A51PA0A087WV96 503 aa19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 TEX33O43247 280 aa19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 CYP3A7P24462 503 aa19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 STK4Q13043 487 aa19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 AP3B2Q13367 1082 aa19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 DYMQ7RTS9 669 aa19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 GLT8D2Q9H1C3 349 aa19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.38■□□□□ 0.69
TMEM50B-210ENST00000542230 GCFC2P16383 781 aaKnown RBP19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 SREBF1P36956 1147 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 ASIC1P78348 528 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 MTMR2Q13614 643 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 LDHDQ86WU2 507 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 ETNPPLQ8TBG4 499 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 MBOAT7Q96N66 472 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 GPRC5DQ9NZD1 345 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 ZNF536O15090 1300 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 H7C1D1 291 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 PRKG1Q13976 671 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 CDKAL1Q5VV42 579 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 KRT79Q5XKE5 535 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 VSTM4Q8IW00 320 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 GGA3Q9NZ52 723 aa19.37■□□□□ 0.69
TMEM50B-210ENST00000542230 SKILP12757 684 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 ADSSL1Q8N142 457 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 CDK5RAP3Q96JB5 506 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 C7orf25Q9BPX7 421 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 EMILIN3Q9NT22 766 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 SPTLC3Q9NUV7 552 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 FEM1BQ9UK73 627 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 POTEB3A0JP26 581 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 USP27XA6NNY8 438 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 POTECB2RU33 542 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 CTNND1O60716 968 aaKnown RBP19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 DDNO94850 711 aaPredicted RBP19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 RHOBTB3O94955 611 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 SPIRE1Q08AE8 756 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 SPP2Q13103 211 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 PAK1Q13153 545 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 POTEBQ6S5H4 581 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 CPXCR1Q8N123 301 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 LARP4BQ92615 738 aaKnown RBP19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 WNK4Q96J92 1243 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 SH2D4AQ9H788 454 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 RMND1Q9NWS8 449 aa19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 POLR2AP24928 1970 aaKnown RBP19.36■□□□□ 0.69
TMEM50B-210ENST00000542230 E9PMD0 336 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 PDE4DQ08499 809 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 TMEM119Q4V9L6 283 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 CREBRFQ8IUR6 639 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 GIMAP8Q8ND71 665 aaPredicted RBP19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 RAD54LQ92698 747 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 WRNIP1Q96S55 665 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 CUEDC2Q9H467 287 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 PIK3CDO00329 1044 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 MSH4O15457 936 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 CCT6AP40227 531 aaKnown RBP19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 KCNB1Q14721 858 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 SV2BQ7L1I2 683 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 GLIS3Q8NEA6 775 aa19.35■□□□□ 0.69
TMEM50B-210ENST00000542230 RAB34Q9BZG1 259 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms