RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 FOXD4L3Q6VB84 417 aaPredicted RBP7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 HEATR3Q7Z4Q2 680 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 NBPF11Q86T75 865 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 FERMT3Q86UX7 667 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 CHURC1Q8WUH1 139 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 CNTNAP5Q8WYK1 1306 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 LPAR1Q92633 364 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 HHIPL1Q96JK4 782 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 AIFM3Q96NN9 605 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 GBP4Q96PP9 640 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 PIGSQ96S52 555 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 WDR18Q9BV38 432 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 SPZ1Q9BXG8 430 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 KIAA1683Q9H0B3 1180 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 TMOD4Q9NZQ9 345 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 MTMR6Q9Y217 621 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 CTDP1Q9Y5B0 961 aaPredicted RBP7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 ATP6V1DQ9Y5K8 247 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 SNCAIPQ9Y6H5 919 aa7.65□□□□□ -1.18
CLTCL1-206ENST00000540896 PNMA6FA0A0J9YX94 578 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 FAM181BA6NEQ2 426 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 BRD1O95696 1058 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 ADH1CP00326 375 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 F13A1P00488 732 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 SCG2P13521 617 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 NCLP19338 710 aaKnown RBP7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 STAT2P52630 851 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 NLRP5P59047 1200 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 NNTQ13423 1086 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 PFKFB3Q16875 520 aaPredicted RBP7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 SYDE2Q5VT97 1194 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 KRT40Q6A162 431 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 CYP4F22Q6NT55 531 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 TRIM46Q7Z4K8 759 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 ERO1BQ86YB8 467 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 ADGRF4Q8IZF3 695 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 FBXO18Q8NFZ0 1043 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 CCDC12Q8WUD4 166 aaPredicted RBP7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 TNPO1Q92973 898 aaKnown RBP7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 IRF7Q92985 503 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 OPTNQ96CV9 577 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 CAPNS2Q96L46 248 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 CDK15Q96Q40 435 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 TANGO6Q9C0B7 1094 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 ZSCAN16Q9H4T2 348 aaPredicted RBP7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 RIOX1Q9H6W3 641 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 JMJD4Q9H9V9 463 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 BRMS1Q9HCU9 246 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 GJB4Q9NTQ9 266 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 VPS54Q9P1Q0 977 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 FEM1BQ9UK73 627 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 KCNJ14Q9UNX9 436 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 ZDHHC9Q9Y397 364 aa7.64□□□□□ -1.19
CLTCL1-206ENST00000540896 OTOFQ9HC10 1997 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 FAM155AB1AL88 458 aaPredicted RBP7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 CFAP99D6REC4 459 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 WDR46O15213 610 aaKnown RBP7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 CYTH3O43739 400 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 VEGFBP49765 207 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 HMGCS2P54868 508 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 NAPAP54920 295 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 SNAP25P60880 206 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 PPATQ06203 517 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 NR5A1Q13285 461 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 PKN1Q16512 942 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 KIAA1755Q5JYT7 1200 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 FAM160B2Q86V87 743 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 RASAL3Q86YV0 1011 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 CCDC148Q8NFR7 591 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 GPKOWQ92917 476 aaPredicted RBP eCLIP7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 WNK4Q96J92 1243 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 RPAP3Q9H6T3 665 aaPredicted RBP7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 AFG3L2Q9Y4W6 797 aa7.63□□□□□ -1.19
CLTCL1-206ENST00000540896 MYH8P13535 1937 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 SMCO2A6NFE2 343 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 GOLGA6L22H0YM25 854 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 ZBTB5O15062 677 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 ZBED4O75132 1171 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 FLOT1O75955 427 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 F12P00748 615 aaPredicted RBP7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 MMP1P03956 469 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 ZBTB48P10074 688 aaPredicted RBP7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 BMP1P13497 986 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 VCAM1P19320 739 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 CALML3P27482 149 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 KRT2P35908 639 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 TRAF1Q13077 416 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 PPIL2Q13356 520 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 DGKZQ13574 1117 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 AGERQ15109 404 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 CDC37Q16543 378 aaPredicted RBP7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 SLC35G1Q2M3R5 365 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 QRICH1Q2TAL8 776 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 WWC2Q6AWC2 1192 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 BTNL9Q6UXG8 535 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 GADL1Q6ZQY3 521 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 FBXO11Q86XK2 927 aa7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 DIS3L2Q8IYB7 885 aaKnown RBP7.62□□□□□ -1.19
CLTCL1-206ENST00000540896 DNAJC5GQ8N7S2 189 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms