RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SIPA1L3	O60292	1781 aa	Predicted RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	hCG_1642624	A0A1W2PR95	340 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	YDJC	A8MPS7	323 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CDK8	P49336	464 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	LIG3	P49916	1009 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CACNB3	P54284	484 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MAP2K1	Q02750	393 aa	Predicted RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MORC3	Q14149	939 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NBPF9	Q3BBW0	867 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	BRDT	Q58F21	947 aa	Predicted RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RGMB	Q6NW40	437 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	APOA5	Q6Q788	366 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DIS3L2	Q8IYB7	885 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MLKL	Q8NB16	471 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MSANTD4	Q8NCY6	345 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	LPAR1	Q92633	364 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RRP36	Q96EU6	259 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	OTUD5	Q96G74	571 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CCDC43	Q96MW1	224 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NAPG	Q99747	312 aa	Predicted RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	HOXC10	Q9NYD6	342 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MAPK8IP1	Q9UQF2	711 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FLT1	P17948	1338 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RREB1	Q92766	1687 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783		A0A1B0GTH6	734 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FAM205C	A6NFA0	338 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PES1	O00541	588 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ERVK-24	P63145	666 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PPARD	Q03181	441 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RTN1	Q16799	776 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DNAJC21	Q5F1R6	531 aa	Known RBP	6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	OXER1	Q8TDS5	423 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	EPSTI1	Q96J88	318 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CSRNP2	Q9H175	543 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	POLD4	Q9HCU8	107 aa		6.33	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZMYM6	O95789	1325 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DUOX1	Q9NRD9	1551 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GYPC	P04921	128 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZNF76	P36508	570 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	C1QTNF8	P60827	252 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SLFN13	Q68D06	897 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GPIHBP1	Q8IV16	184 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FAM71B	Q8TC56	605 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	COA7	Q96BR5	231 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PANX2	Q96RD6	677 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NUP88	Q99567	741 aa	Predicted RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CHP1	Q99653	195 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ELP3	Q9H9T3	547 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FBXO40	Q9UH90	709 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783		A0A087X0B3	334 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L15	C9J2P7	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L13	C9JLJ4	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L11	C9JVI0	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L18	D6R9N7	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L22	D6RA61	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L17	D6RBQ6	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L19	D6RCP7	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L20	D6RJB6	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MFAP3L	O75121	409 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SYF2	O95926	243 aa	Known RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GH2	P01242	217 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	PLCD1	P51178	756 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CORO7	P57737	925 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CTDSPL2	Q05D32	466 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	USP17L24	Q0WX57	530 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TAF1C	Q15572	869 aa	Predicted RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ASPRV1	Q53RT3	343 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	APTX	Q7Z2E3	356 aa	Known RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	NOSTRIN	Q8IVI9	506 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZNF784	Q8NCA9	323 aa	Predicted RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZNF280C	Q8ND82	737 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TRPM4	Q8TD43	1214 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	AFAP1L1	Q8TED9	768 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	BLZF1	Q9H2G9	400 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FAM217B	Q9NTX9	383 aa	Predicted RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FBXO2	Q9UK22	296 aa	Predicted RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MYO6	Q9UM54	1294 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	UBR3	Q6ZT12	1888 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	POTEB2	H3BUK9	544 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SH2B2	O14492	632 aa	Predicted RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	N4BP3	O15049	544 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CCT5	P48643	541 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	SSRP1	Q08945	709 aa	Known RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ZYX	Q15942	572 aa	Known RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	C12orf60	Q5U649	245 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RASGRP2	Q7LDG7	609 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	RASSF8	Q8NHQ8	419 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	EEF2KMT	Q96G04	330 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MMS19	Q96T76	1030 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TAB2	Q9NYJ8	693 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	DACH1	Q9UI36	760 aa		6.32	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	MYH14	Q7Z406	1995 aa	Known RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	COL1A1	P02452	1464 aa	Predicted RBP	6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	CCL15-CCL14	A0A0B4J2E2	113 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	TRIM75P	A6NK02	468 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	FLOT1	O75955	427 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GGCX	P38435	758 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	ARHGAP25	P42331	645 aa		6.31	□□□□□ -1.4
RAPGEF4-215	ENST00000540783	GCLC	P48506	637 aa	Predicted RBP	6.31	□□□□□ -1.4

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