RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZMYND12Q9H0C1 365 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 EPC1Q9H2F5 836 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 A0A0U1RQJ8 604 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 LGALS16A8MUM7 142 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 RNF225M0QZC1 329 aaPredicted RBP16.29■□□□□ 0.2
CDCA3-207ENST00000538862 PSMA7O14818 248 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 IL1R1P14778 569 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 INF2Q27J81 1249 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 KIAA0825Q8IV33 1275 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 SLC35F6Q8N357 371 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 MB21D1Q8N884 522 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 ACRBPQ8NEB7 543 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 RASSF8Q8NHQ8 419 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 ATRIPQ8WXE1 791 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
CDCA3-207ENST00000538862 NAPGQ99747 312 aaPredicted RBP16.29■□□□□ 0.2
CDCA3-207ENST00000538862 TMEM47Q9BQJ4 181 aa16.29■□□□□ 0.2
CDCA3-207ENST00000538862 SMARCA1P28370 1054 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 ARHGAP25P42331 645 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 ZNF280AP59817 542 aaPredicted RBP16.28■□□□□ 0.2
CDCA3-207ENST00000538862 SLC4A8Q2Y0W8 1093 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 TAF3Q5VWG9 929 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 KRT25Q7Z3Z0 450 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 CERS5Q8N5B7 392 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 OR8K1Q8NGG5 319 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 ZNF507Q8TCN5 953 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 HNRNPLLQ8WVV9 542 aaKnown RBP16.28■□□□□ 0.2
CDCA3-207ENST00000538862 EPN1Q9Y6I3 576 aaPredicted RBP16.28■□□□□ 0.2
CDCA3-207ENST00000538862 TRPM7Q96QT4 1865 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 MYH1P12882 1939 aa16.28■□□□□ 0.2
CDCA3-207ENST00000538862 RASA1P20936 1047 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 PPP1R2P41236 205 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 WHAMMP3Q1A5X7 153 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 MSANTD4Q8NCY6 345 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 TGFBRAP1Q8WUH2 860 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 CCDC47Q96A33 483 aaKnown RBP16.27■□□□□ 0.2
CDCA3-207ENST00000538862 DNAJC7Q99615 494 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 PGAP2Q9UHJ9 254 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 CAPN11Q9UMQ6 739 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 SCAF8Q9UPN6 1271 aaKnown RBP16.27■□□□□ 0.2
CDCA3-207ENST00000538862 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.2
CDCA3-207ENST00000538862 KLRF2D3W0D1 207 aa16.27■□□□□ 0.19
CDCA3-207ENST00000538862 F8W031 263 aaPredicted RBP16.27■□□□□ 0.19
CDCA3-207ENST00000538862 SASH3O75995 380 aa16.27■□□□□ 0.19
CDCA3-207ENST00000538862 NDUFA10O95299 355 aa16.27■□□□□ 0.19
CDCA3-207ENST00000538862 DNM2P50570 870 aa16.27■□□□□ 0.19
CDCA3-207ENST00000538862 ORC2Q13416 577 aaPredicted RBP16.27■□□□□ 0.19
CDCA3-207ENST00000538862 FUT8Q9BYC5 575 aa16.27■□□□□ 0.19
CDCA3-207ENST00000538862 MAGEC2Q9UBF1 373 aaPredicted RBP16.27■□□□□ 0.19
CDCA3-207ENST00000538862 RAB21Q9UL25 225 aa16.27■□□□□ 0.19
CDCA3-207ENST00000538862 STX8Q9UNK0 236 aa16.27■□□□□ 0.19
CDCA3-207ENST00000538862 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.19
CDCA3-207ENST00000538862 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 TRIM49BA6NDI0 452 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 PP2D1A8MPX8 630 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 GNA11P29992 359 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 PMS1P54277 932 aaKnown RBP16.26■□□□□ 0.19
CDCA3-207ENST00000538862 DIXDC1Q155Q3 683 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 TTI2Q6NXR4 508 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 ZNF662Q6ZS27 426 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 ZC3H15Q8WU90 426 aaKnown RBP16.26■□□□□ 0.19
CDCA3-207ENST00000538862 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 HAUS4Q9H6D7 363 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 GGA3Q9NZ52 723 aa16.26■□□□□ 0.19
CDCA3-207ENST00000538862 BICDL2A1A5D9 508 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 TMEM88BA6NKF7 163 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 TUBBP07437 444 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 OR52Z1P0C646 297 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 NONOQ15233 471 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDCA3-207ENST00000538862 TSR1Q2NL82 804 aaKnown RBP16.25■□□□□ 0.19
CDCA3-207ENST00000538862 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 CABP7Q86V35 215 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 NEDD1Q8NHV4 660 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 C7orf25Q9BPX7 421 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 SLF1Q9BQI6 1058 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 ANKZF1Q9H8Y5 726 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 FLT1P17948 1338 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 MYO3BQ8WXR4 1341 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
CDCA3-207ENST00000538862 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 NBPF9Q3BBW0 867 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 OGFOD1Q8N543 542 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 SLC44A5Q8NCS7 719 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 CHP1Q99653 195 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 ZNF408Q9H9D4 720 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
CDCA3-207ENST00000538862 CDK5RAP2Q96SN8 1893 aa16.25■□□□□ 0.19
CDCA3-207ENST00000538862 CCDC66A2RUB6 948 aa16.24■□□□□ 0.19
CDCA3-207ENST00000538862 CTAGE15A4D2H0 777 aa16.24■□□□□ 0.19
CDCA3-207ENST00000538862 CTAGE8P0CG41 777 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms