RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 KLRC4O43908 158 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 PPP1R11O60927 126 aaPredicted RBP9.71□□□□□ -0.85
UBE3B-208ENST00000538070 PHACTR2O75167 634 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.85
UBE3B-208ENST00000538070 SHMT1P34896 483 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 EPS15P42566 896 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 ICA1Q05084 483 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 ZNF543Q08ER8 600 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 QRICH1Q2TAL8 776 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 POTEBQ6S5H4 581 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 TMTC1Q8IUR5 882 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.85
UBE3B-208ENST00000538070 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 RGS22Q8NE09 1264 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 L2HGDHQ9H9P8 463 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 BMP2KQ9NSY1 1161 aaPredicted RBP9.71□□□□□ -0.85
UBE3B-208ENST00000538070 ZNF446Q9NWS9 450 aa9.71□□□□□ -0.85
UBE3B-208ENST00000538070 SFI1A8K8P3 1242 aa9.71□□□□□ -0.86
UBE3B-208ENST00000538070 H0YIN7 160 aa9.71□□□□□ -0.86
UBE3B-208ENST00000538070 CFBP00751 764 aa9.71□□□□□ -0.86
UBE3B-208ENST00000538070 GH2P01242 217 aa9.71□□□□□ -0.86
UBE3B-208ENST00000538070 APBA1Q02410 837 aa9.71□□□□□ -0.86
UBE3B-208ENST00000538070 PLS1Q14651 629 aa9.71□□□□□ -0.86
UBE3B-208ENST00000538070 TMED8Q6PL24 325 aaPredicted RBP9.71□□□□□ -0.86
UBE3B-208ENST00000538070 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.86
UBE3B-208ENST00000538070 LIMA1Q9UHB6 759 aaKnown RBP9.71□□□□□ -0.86
UBE3B-208ENST00000538070 DDX41Q9UJV9 622 aaKnown RBP9.71□□□□□ -0.86
UBE3B-208ENST00000538070 AKR1B10O60218 316 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 TADA3O75528 432 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 NPR1P16066 1061 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 ALDH1B1P30837 517 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 PABPC4Q13310 644 aaKnown RBP eCLIP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 GRB10Q13322 594 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 KCTD19Q17RG1 926 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 ASPRV1Q53RT3 343 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 TCERG1LQ5VWI1 586 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 GALNT17Q6IS24 598 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 APOBEC3HQ6NTF7 200 aaKnown RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 RRAGAQ7L523 313 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 MAEAQ7L5Y9 396 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 ELOA2Q8IYF1 753 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 MMTAG2Q9BU76 263 aaKnown RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 PARD6BQ9BYG5 372 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 CCSER1Q9C0I3 900 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 KBTBD4Q9NVX7 518 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 ZBTB12Q9Y330 459 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 PPIP5K2O43314 1243 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 ECE2O60344 883 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 CCNE1P24864 410 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 RNASE9P60153 205 aaKnown RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 FAM193AP78312 1265 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 CDC37Q16543 378 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 TBC1D10BQ4KMP7 808 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 CNNM4Q6P4Q7 775 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 GOLGA1Q92805 767 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 CCDC42Q96M95 316 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 SUGCTQ9HAC7 445 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 POTEFA5A3E0 1075 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 M0R2N6 131 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 DDX39AO00148 427 aaKnown RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 NDUFA10O95299 355 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 POTEIP0CG38 1075 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 TNNT3P45378 269 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 BMS1Q14692 1282 aaKnown RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 ECM1Q16610 540 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 GPBP1Q86WP2 473 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 KIAA0895Q8NCT3 520 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 GIMAP8Q8ND71 665 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 ANKS1AQ92625 1134 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 CSRNP1Q96S65 589 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 FEZ1Q99689 392 aa9.7□□□□□ -0.86
UBE3B-208ENST00000538070 DUSP9Q99956 384 aaKnown RBP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.86
UBE3B-208ENST00000538070 SPATA31A6Q5VVP1 1343 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 BICDL2A1A5D9 508 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 LGALS16A8MUM7 142 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 PDE6BP35913 854 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 CCDC93Q567U6 631 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 TTI2Q6NXR4 508 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 TRERF1Q96PN7 1200 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 NAPGQ99747 312 aaPredicted RBP9.69□□□□□ -0.86
UBE3B-208ENST00000538070 SEMA6BQ9H3T3 888 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 DOCK2Q92608 1830 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 SNED1Q8TER0 1413 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 ECM29Q5VYK3 1845 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 ZBTB5O15062 677 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 RHOBTB3O94955 611 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 CXCR5P32302 372 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 SPA17Q15506 151 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 CYP2W1Q8TAV3 490 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 PNMA5Q96PV4 448 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 MRFAP1Q9Y605 127 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 DNM2P50570 870 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 MAP3K9P80192 1104 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms