RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 SLC44A5Q8NCS7 719 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 LINC00116Q8NCU8 138 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
GGA3-201ENST00000537686 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
GGA3-201ENST00000537686 BRIP1Q9BX63 1249 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 FAM204AQ9H8W3 233 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 UTP11Q9Y3A2 253 aaKnown RBP11.08□□□□□ -0.64
GGA3-201ENST00000537686 UTYO14607 1347 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 ZNF500O60304 480 aaPredicted RBP11.08□□□□□ -0.64
GGA3-201ENST00000537686 H2AFZP0C0S5 128 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 MXRA7P84157 204 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 TBC1D10BQ4KMP7 808 aaPredicted RBP11.08□□□□□ -0.64
GGA3-201ENST00000537686 CCDC93Q567U6 631 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 H2AFVQ71UI9 128 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 CCDC105Q8IYK2 499 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 ANKS4BQ8N8V4 417 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 KIAA1524Q8TCG1 905 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 CPVLQ9H3G5 476 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 CD209Q9NNX6 404 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 SSX2IPQ9Y2D8 614 aa11.08□□□□□ -0.64
GGA3-201ENST00000537686 CDHR2Q9BYE9 1310 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 NR2F2P24468 414 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 C6orf163Q5TEZ5 329 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 SYCE1Q8N0S2 351 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 GIMAP7Q8NHV1 300 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 GOLGA5Q8TBA6 731 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 DCPSQ96C86 337 aaKnown RBP11.07□□□□□ -0.64
GGA3-201ENST00000537686 MAGEF1Q9HAY2 307 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 ATF5Q9Y2D1 282 aaPredicted RBP11.07□□□□□ -0.64
GGA3-201ENST00000537686 FERP16591 822 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 FKBP3Q00688 224 aaKnown RBP11.07□□□□□ -0.64
GGA3-201ENST00000537686 ZBTB8OSQ8IWT0 167 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 SH3RF3Q8TEJ3 882 aaPredicted RBP11.07□□□□□ -0.64
GGA3-201ENST00000537686 RNF34Q969K3 372 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 PNMA2Q9UL42 364 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 LTN1O94822 1766 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 IKBKBO14920 756 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 C21orf2O43822 256 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 MNAT1P51948 309 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 PAK2Q13177 524 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 ATG9AQ7Z3C6 839 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 NKIRAS1Q9NYS0 192 aa11.07□□□□□ -0.64
GGA3-201ENST00000537686 SRPRBQ9Y5M8 271 aaKnown RBP11.07□□□□□ -0.64
GGA3-201ENST00000537686 E7EVH7 732 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 GOLGA8FQ08AF8 430 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 GOLGA8DPQ0D2H9 430 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 CCDC6Q16204 474 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 UBE2SQ16763 222 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 EXOC3L4Q17RC7 722 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 STAG1Q8WVM7 1258 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 DDX41Q9UJV9 622 aaKnown RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 AMFRQ9UKV5 643 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 MEIS1O00470 390 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 BUB1O43683 1085 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 CAMTA2O94983 1202 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 STAT2P52630 851 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 POLGP54098 1239 aaPredicted RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 TTLL6Q8N841 843 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 P2RX5Q93086 422 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 ZNF577Q9BSK1 485 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 C1orf112Q9NSG2 853 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 GOLGA6BA6NDN3 693 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 KCNK3O14649 394 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 HNRNPDLO14979 420 aaKnown RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 FAM47CQ5HY64 1035 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 CCDC121Q6ZUS5 278 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 CYB5R4Q7L1T6 521 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 FOXP4Q8IVH2 680 aaPredicted RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 ZNF34Q8IZ26 560 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 POMGNT1Q8WZA1 660 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 SAMSN1Q9NSI8 373 aaKnown RBP11.06□□□□□ -0.64
GGA3-201ENST00000537686 MAN1B1Q9UKM7 699 aa11.06□□□□□ -0.64
GGA3-201ENST00000537686 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 DAPK3O43293 454 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 GH2P01242 217 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 IFNB1P01574 187 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 VIMP08670 466 aaKnown RBP11.05□□□□□ -0.64
GGA3-201ENST00000537686 RFX5P48382 616 aaPredicted RBP11.05□□□□□ -0.64
GGA3-201ENST00000537686 PPP1R21Q6ZMI0 780 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 SMAP1Q8IYB5 467 aaPredicted RBP11.05□□□□□ -0.64
GGA3-201ENST00000537686 MASTLQ96GX5 879 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 DHTKD1Q96HY7 919 aaPredicted RBP11.05□□□□□ -0.64
GGA3-201ENST00000537686 WDR11Q9BZH6 1224 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 ABCC12Q96J65 1359 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 RPAP1Q9BWH6 1393 aaPredicted RBP11.05□□□□□ -0.64
GGA3-201ENST00000537686 BCL9O00512 1426 aa11.05□□□□□ -0.64
GGA3-201ENST00000537686 DMP1Q13316 513 aaPredicted RBP11.05□□□□□ -0.64
GGA3-201ENST00000537686 RASA3Q14644 834 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms