RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 FAM196AQ6ZSG2 479 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 UNC13DQ70J99 1090 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 LARP4BQ92615 738 aaKnown RBP15.95■□□□□ 0.14
USP44-203ENST00000537435 CDK5RAP3Q96JB5 506 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 BTAF1O14981 1849 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 MACROD2A1Z1Q3 448 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
USP44-203ENST00000537435 CDK17Q00537 523 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 TMEM266Q2M3C6 531 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 VWA3BQ502W6 1294 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 FAM163AQ96GL9 167 aaPredicted RBP15.95■□□□□ 0.14
USP44-203ENST00000537435 CCDC42Q96M95 316 aa15.95■□□□□ 0.14
USP44-203ENST00000537435 PURBQ96QR8 312 aaKnown RBP15.95■□□□□ 0.14
USP44-203ENST00000537435 PVALEFA0A1B0GWK0 134 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 POTEMA6NI47 508 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 hCG_1984214I3L0E3 225 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 EDIL3O43854 480 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 PLEKP08567 350 aaPredicted RBP15.94■□□□□ 0.14
USP44-203ENST00000537435 ADCY7P51828 1080 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 VAV2P52735 878 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 CKAP4Q07065 602 aaKnown RBP15.94■□□□□ 0.14
USP44-203ENST00000537435 LRRC47Q8N1G4 583 aaKnown RBP15.94■□□□□ 0.14
USP44-203ENST00000537435 ZNF713Q8N859 430 aaPredicted RBP15.94■□□□□ 0.14
USP44-203ENST00000537435 PSD3Q9NYI0 1048 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 GAKO14976 1311 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 LRRIQ3A6PVS8 624 aaPredicted RBP15.94■□□□□ 0.14
USP44-203ENST00000537435 ZNF263O14978 683 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 LMAN1P49257 510 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 KIF5AQ12840 1032 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 KRT26Q7Z3Y9 468 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 SLF2Q8IX21 1173 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 NDST4Q9H3R1 872 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 MTMR4Q9NYA4 1195 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 SIK3Q9Y2K2 1263 aa15.94■□□□□ 0.14
USP44-203ENST00000537435 ANO9A1A5B4 782 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 EPHB6O15197 1021 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 EIF6P56537 245 aaKnown RBP15.93■□□□□ 0.14
USP44-203ENST00000537435 SPA17Q15506 151 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 SNX29Q8TEQ0 813 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 SECISBP2LQ93073 1101 aaKnown RBP15.93■□□□□ 0.14
USP44-203ENST00000537435 IQCDQ96DY2 449 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 RPGRIP1Q96KN7 1286 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 NUDT12Q9BQG2 462 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 FAM207AQ9NSI2 230 aaPredicted RBP15.93■□□□□ 0.14
USP44-203ENST00000537435 PLAGL2Q9UPG8 496 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 ZNF185O15231 689 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 IDEP14735 1019 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 PICALMQ13492 652 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 ASPRV1Q53RT3 343 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 GUF1Q8N442 669 aaKnown RBP15.93■□□□□ 0.14
USP44-203ENST00000537435 RAD54LQ92698 747 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 CCDC102AQ96A19 550 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 RAB34Q9BZG1 259 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 TSGA10Q9BZW7 698 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 ARHGAP20Q9P2F6 1191 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 FAN1Q9Y2M0 1017 aa15.93■□□□□ 0.14
USP44-203ENST00000537435 CDK5RAP2Q96SN8 1893 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 HNRNPH3P31942 346 aaKnown RBP15.92■□□□□ 0.14
USP44-203ENST00000537435 MAN2A1Q16706 1144 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 CCDC96Q2M329 555 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 CLEC10AQ8IUN9 316 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 CAGE1Q8TC20 777 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 GPCPD1Q9NPB8 672 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 JADE2Q9NQC1 790 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 FGFR1OPO95684 399 aaKnown RBP15.92■□□□□ 0.14
USP44-203ENST00000537435 AKR1B1P15121 316 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 TNNI2P48788 182 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 CRY2Q49AN0 593 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 KRT79Q5XKE5 535 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 KCNK18Q7Z418 384 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 CERKQ8TCT0 537 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 SMCR8Q8TEV9 937 aaPredicted RBP15.92■□□□□ 0.14
USP44-203ENST00000537435 TBC1D22AQ8WUA7 517 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 DDX12PQ92771 950 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 DAGLAQ9Y4D2 1042 aa15.92■□□□□ 0.14
USP44-203ENST00000537435 PDE2AO00408 941 aaPredicted RBP15.91■□□□□ 0.14
USP44-203ENST00000537435 USO1O60763 962 aaKnown RBP15.91■□□□□ 0.14
USP44-203ENST00000537435 MCM3P25205 808 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 PDIA5Q14554 519 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 HSP90B2PQ58FF3 399 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 DPP8Q6V1X1 898 aaPredicted RBP15.91■□□□□ 0.14
USP44-203ENST00000537435 TBC1D16Q8TBP0 767 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 RBM17Q96I25 401 aaKnown RBP15.91■□□□□ 0.14
USP44-203ENST00000537435 IFIH1Q9BYX4 1025 aaKnown RBP15.91■□□□□ 0.14
USP44-203ENST00000537435 ACBD3Q9H3P7 528 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 PLIN4Q96Q06 1357 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 SNHG28P0DPA3 235 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 ERCC3P19447 782 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 KIF11P52732 1056 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 LRRC63Q05C16 580 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 GABPAQ06546 454 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 UBE2SQ16763 222 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 FAM71BQ8TC56 605 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 DEF6Q9H4E7 631 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 PCDHA13Q9Y5I0 950 aa15.91■□□□□ 0.14
USP44-203ENST00000537435 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
USP44-203ENST00000537435 TNNT3P45378 269 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms