RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SOD2P04179 222 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 POU3F3P20264 500 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-208ENST00000536710 DNM2P50570 870 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 RPL11P62913 178 aaKnown RBP7.44□□□□□ -1.22
PRKDC-208ENST00000536710 ST5P78524 1137 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 SART3Q15020 963 aaKnown RBP7.44□□□□□ -1.22
PRKDC-208ENST00000536710 HLA-DQA1Q5Y7H0 255 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 ABHD17CQ6PCB6 329 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 PCDH19Q8TAB3 1148 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 USP7Q93009 1102 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 MISP3Q96FF7 219 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 CEP89Q96ST8 783 aa7.44□□□□□ -1.22
PRKDC-208ENST00000536710 C7orf72A4D263 438 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 FAM47E-STBD1D6RA91 191 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 PDGFRBP09619 1106 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 GRK2P25098 689 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 GRK3P35626 688 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 BCL6P41182 706 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 SCNN1BP51168 640 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 LSAMPQ13449 338 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 SEPT7Q16181 437 aaKnown RBP7.43□□□□□ -1.22
PRKDC-208ENST00000536710 FAM47CQ5HY64 1035 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 OR2W6PQ8NHA6 318 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 STAG1Q8WVM7 1258 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 KCNJ15Q99712 375 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 METTL14Q9HCE5 456 aaKnown RBP7.43□□□□□ -1.22
PRKDC-208ENST00000536710 BSDC1Q9NW68 430 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-208ENST00000536710 CLDND1Q9NY35 253 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 SLAMF8Q9P0V8 285 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 KLHL42Q9P2K6 505 aa7.43□□□□□ -1.22
PRKDC-208ENST00000536710 PPARGC1AQ9UBK2 798 aaKnown RBP7.43□□□□□ -1.22
PRKDC-208ENST00000536710 A0A1W2PQ27 194 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 A0A1W2PQ64 194 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 A0A1W2PQC6 194 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 A0A1W2PQD8 194 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 M0R2C6 588 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 GLRX3O76003 335 aaKnown RBP7.42□□□□□ -1.22
PRKDC-208ENST00000536710 S100BP04271 92 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-208ENST00000536710 GTF2A2P52657 109 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 ZP2Q05996 745 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 DHCR24Q15392 516 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 SKOR2Q2VWA4 1001 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-208ENST00000536710 PLEKHG6Q3KR16 790 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 PRSS36Q5K4E3 855 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 TMEM52Q8NDY8 209 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 FBXW5Q969U6 566 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 SEMA6BQ9H3T3 888 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 CABP5Q9NP86 173 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 CATSPERZQ9NTU4 200 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 TYW1Q9NV66 732 aaKnown RBP7.42□□□□□ -1.22
PRKDC-208ENST00000536710 GULP1Q9UBP9 304 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 FBXL7Q9UJT9 491 aa7.42□□□□□ -1.22
PRKDC-208ENST00000536710 CCDC66A2RUB6 948 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 ALG1L2C9J202 215 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 GSTA4O15217 222 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 FURINP09958 794 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 PYGMP11217 842 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 KCNA6P17658 529 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 DUSP4Q13115 394 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 ANGEL2Q5VTE6 544 aaKnown RBP7.41□□□□□ -1.22
PRKDC-208ENST00000536710 CEP68Q76N32 757 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 NXPE1Q8N323 547 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 CISD2Q8N5K1 135 aaKnown RBP7.41□□□□□ -1.22
PRKDC-208ENST00000536710 WDR66Q8TBY9 1149 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 PI4K2BQ8TCG2 481 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 TMEM169Q96HH4 297 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 MAP6Q96JE9 813 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 TTC1Q99614 292 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 MARCH2Q9P0N8 246 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 TNFRSF10DQ9UBN6 386 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 SLC5A6Q9Y289 635 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 ZKSCAN5Q9Y2L8 839 aa7.41□□□□□ -1.22
PRKDC-208ENST00000536710 ZNF891A8MT65 544 aaPredicted RBP7.4□□□□□ -1.22
PRKDC-208ENST00000536710 GAS7O60861 476 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 USP2O75604 605 aaPredicted RBP7.4□□□□□ -1.22
PRKDC-208ENST00000536710 GUCY2FP51841 1108 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 IL2P60568 153 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 TMEM177Q53S58 311 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 INTS5Q6P9B9 1019 aaKnown RBP7.4□□□□□ -1.22
PRKDC-208ENST00000536710 CEP128Q6ZU80 1094 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 ANKLE2Q86XL3 938 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 TEX2Q8IWB9 1127 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 USP33Q8TEY7 942 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 BCL7CQ8WUZ0 217 aaPredicted RBP7.4□□□□□ -1.22
PRKDC-208ENST00000536710 TRMT2BQ96GJ1 504 aaKnown RBP7.4□□□□□ -1.22
PRKDC-208ENST00000536710 HHIPL1Q96JK4 782 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 CELF4Q9BZC1 486 aaKnown RBP7.4□□□□□ -1.22
PRKDC-208ENST00000536710 ADAMTS10Q9H324 1103 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 IFT22Q9H7X7 185 aa7.4□□□□□ -1.22
PRKDC-208ENST00000536710 G3BP2Q9UN86 482 aaKnown RBP7.4□□□□□ -1.22
PRKDC-208ENST00000536710 WTIPA6NIX2 430 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-208ENST00000536710 CBX4O00257 560 aa7.39□□□□□ -1.23
PRKDC-208ENST00000536710 BRINP1O60477 761 aa7.39□□□□□ -1.23
PRKDC-208ENST00000536710 COBLO75128 1261 aa7.39□□□□□ -1.23
PRKDC-208ENST00000536710 EYA4O95677 639 aa7.39□□□□□ -1.23
PRKDC-208ENST00000536710 CKMP06732 381 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms