RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PPP1R14AQ96A00 147 aa8.3□□□□□ -1.08
CLIP1-207ENST00000536634 INTS4Q96HW7 963 aaKnown RBP8.3□□□□□ -1.08
CLIP1-207ENST00000536634 PTCHD1Q96NR3 888 aa8.3□□□□□ -1.08
CLIP1-207ENST00000536634 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 TBX1O43435 398 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 KCNH1O95259 989 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 AMPD2Q01433 879 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 RCSD1Q6JBY9 416 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 TANGO6Q9C0B7 1094 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 R3HCC1Q9Y3T6 440 aaKnown RBP8.29□□□□□ -1.08
CLIP1-207ENST00000536634 TAF6LQ9Y6J9 622 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 NEURL4Q96JN8 1562 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 CDC42BPAQ5VT25 1732 aa8.29□□□□□ -1.08
CLIP1-207ENST00000536634 PLXNC1O60486 1568 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 ARHGAP35Q9NRY4 1499 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 A0A1W2PQ45 241 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-207ENST00000536634 A0A1W2PQY0 241 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 WTIPA6NIX2 430 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-207ENST00000536634 NAT2P11245 290 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 DDR2Q16832 855 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 GALNT18Q6P9A2 607 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 MRGPRX3Q96LB0 322 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 SLC6A17Q9H1V8 727 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 IMPACTQ9P2X3 320 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 BACE2Q9Y5Z0 518 aa8.28□□□□□ -1.08
CLIP1-207ENST00000536634 POLR1AO95602 1720 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-207ENST00000536634 DNMT1P26358 1616 aaKnown RBP8.28□□□□□ -1.08
CLIP1-207ENST00000536634 FARP2O94887 1054 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-207ENST00000536634 PRKCAP17252 672 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 SDHBP21912 280 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 SV2CQ496J9 727 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 CYP2R1Q6VVX0 501 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 TRIM59Q8IWR1 403 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 CRTAC1Q9NQ79 661 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 CPS1P31327 1500 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 CLIP1P30622 1438 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 FMN1Q68DA7 1419 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 VWDEQ8N2E2 1590 aa8.27□□□□□ -1.09
CLIP1-207ENST00000536634 SYCP2Q9BX26 1530 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 C2orf71A6NGG8 1288 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 STK10O94804 968 aaKnown RBP8.26□□□□□ -1.09
CLIP1-207ENST00000536634 ITGAVP06756 1048 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 MSL3P1P0C860 447 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 PDE6BP35913 854 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 RAB33AQ14088 237 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 ADGRF1Q5T601 910 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 HLA-DQA1Q5Y7H0 255 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 EEF1DP3Q658K8 133 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 GTF2IRD2BQ6EKJ0 949 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 GTF2IRD2Q86UP8 949 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 ZNF227Q86WZ6 799 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 IRF2BP1Q8IU81 584 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 NUP43Q8NFH3 380 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 BTN2A2Q8WVV5 523 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 EPB41L4BQ9H329 900 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 DCP1AQ9NPI6 582 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-207ENST00000536634 ACSL6Q9UKU0 697 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 CDK11AQ9UQ88 783 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-207ENST00000536634 EEA1Q15075 1411 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 SHANK2Q9UPX8 1470 aa8.26□□□□□ -1.09
CLIP1-207ENST00000536634 NOP56O00567 594 aaKnown RBP8.25□□□□□ -1.09
CLIP1-207ENST00000536634 TOM1O60784 492 aa8.25□□□□□ -1.09
CLIP1-207ENST00000536634 PNLIPP16233 465 aa8.25□□□□□ -1.09
CLIP1-207ENST00000536634 ATP2B1P20020 1258 aa8.25□□□□□ -1.09
CLIP1-207ENST00000536634 MVKQ03426 396 aa8.25□□□□□ -1.09
CLIP1-207ENST00000536634 CYP4F3Q08477 520 aa8.25□□□□□ -1.09
CLIP1-207ENST00000536634 POMZP3Q6PJE2 187 aa8.25□□□□□ -1.09
CLIP1-207ENST00000536634 INO80Q9ULG1 1556 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-207ENST00000536634 A2ML1A8K2U0 1454 aa8.25□□□□□ -1.09
CLIP1-207ENST00000536634 ATP7AQ04656 1500 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 TBC1D8O95759 1140 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 C8AP07357 584 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 SEPHS1P49903 392 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 SCRN1Q12765 414 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 SLC10A6Q3KNW5 377 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 EEPD1Q7L9B9 569 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 ZNF605Q86T29 641 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 JAMLQ86YT9 394 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 CRACR2BQ8N4Y2 399 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-207ENST00000536634 COPS5Q92905 334 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 FAM84AQ96KN4 292 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 GPRC5CQ9NQ84 441 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 RGS17Q9UGC6 210 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-207ENST00000536634 STRCP1A6NGW2 1772 aa8.24□□□□□ -1.09
CLIP1-207ENST00000536634 CYP4F8P98187 520 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 LAPTM5Q13571 262 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 ZNF124Q15973 351 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 CPNE8Q86YQ8 564 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 FBXO15Q8NCQ5 510 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-207ENST00000536634 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 LRP2BPQ9P2M1 347 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 A2MP01023 1474 aa8.23□□□□□ -1.09
CLIP1-207ENST00000536634 MYOCOSA0A1B0GUC4 107 aa8.22□□□□□ -1.09
CLIP1-207ENST00000536634 GTF2F1P35269 517 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLIP1-207ENST00000536634 MBLAC2Q68D91 279 aa8.22□□□□□ -1.09
CLIP1-207ENST00000536634 SYDE1Q6ZW31 735 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-207ENST00000536634 CKAP2LQ8IYA6 745 aa8.22□□□□□ -1.09
CLIP1-207ENST00000536634 TRIM55Q9BYV6 548 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms