RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ITPK1Q13572 414 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 PUM1Q14671 1186 aaKnown RBP eCLIP5.66□□□□□ -1.5
YBX3-205ENST00000536107 SNX17Q15036 470 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 SCARA3Q6AZY7 606 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 ZDHHC14Q8IZN3 488 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 PANK1Q8TE04 598 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 ZNF622Q969S3 477 aaKnown RBP eCLIP5.66□□□□□ -1.5
YBX3-205ENST00000536107 TAOK3Q9H2K8 898 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 FBRSQ9HAH7 460 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 ANO2Q9NQ90 1003 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 IRAK3Q9Y616 596 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 C5P01031 1676 aa5.66□□□□□ -1.5
YBX3-205ENST00000536107 CELF2O95319 508 aaKnown RBP5.65□□□□□ -1.5
YBX3-205ENST00000536107 ABL1P00519 1130 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 BMP6P22004 513 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 PDE6BP35913 854 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 DDR1Q08345 913 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 NOGQ13253 232 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 ZNF211Q13398 564 aaPredicted RBP5.65□□□□□ -1.5
YBX3-205ENST00000536107 PKN2Q16513 984 aaKnown RBP5.65□□□□□ -1.5
YBX3-205ENST00000536107 GAB4Q2WGN9 574 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 CST9Q5W186 159 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 GRIN3AQ8TCU5 1115 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 RAPGEF4Q8WZA2 1011 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 ZNF408Q9H9D4 720 aa5.65□□□□□ -1.5
YBX3-205ENST00000536107 RNF123Q5XPI4 1314 aa5.65□□□□□ -1.51
YBX3-205ENST00000536107 CASP8AP2Q9UKL3 1982 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 PLP2Q04941 152 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.64□□□□□ -1.51
YBX3-205ENST00000536107 SYNE4Q8N205 404 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 EPS8L3Q8TE67 593 aaKnown RBP5.64□□□□□ -1.51
YBX3-205ENST00000536107 PIGBQ92521 554 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 ELMO3Q96BJ8 720 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 CRELD1Q96HD1 420 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 SRP68Q9UHB9 627 aaKnown RBP5.64□□□□□ -1.51
YBX3-205ENST00000536107 PCDHA4Q9UN74 947 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 SAMM50Q9Y512 469 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 LTBP1Q14766 1721 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 KIAA1551Q9HCM1 1747 aa5.64□□□□□ -1.51
YBX3-205ENST00000536107 DOT1LQ8TEK3 1739 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 WASH4PA8MWX3 477 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 NDUFB5O43674 189 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 AKAP8O43823 692 aaKnown RBP5.63□□□□□ -1.51
YBX3-205ENST00000536107 TPP2P29144 1249 aaPredicted RBP5.63□□□□□ -1.51
YBX3-205ENST00000536107 NKG7Q16617 165 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 FRMD5Q7Z6J6 570 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 DHX38Q92620 1227 aaKnown RBP5.63□□□□□ -1.51
YBX3-205ENST00000536107 FAM122AQ96E09 287 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 NECAB3Q96P71 396 aaPredicted RBP5.63□□□□□ -1.51
YBX3-205ENST00000536107 CITED4Q96RK1 184 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 LUC7LQ9NQ29 371 aaKnown RBP5.63□□□□□ -1.51
YBX3-205ENST00000536107 RNF186Q9NXI6 227 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 SAGE1Q9NXZ1 904 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 TMOD3Q9NYL9 352 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 MBD1Q9UIS9 605 aaPredicted RBP5.63□□□□□ -1.51
YBX3-205ENST00000536107 TTC21AQ8NDW8 1320 aa5.63□□□□□ -1.51
YBX3-205ENST00000536107 C4AP0C0L4 1744 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 ARFGEF1Q9Y6D6 1849 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 H0YGN5 161 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 HRKO00198 91 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 POLRMTO00411 1230 aaKnown RBP5.62□□□□□ -1.51
YBX3-205ENST00000536107 RPS6KA4O75676 772 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 SPPL2CQ8IUH8 684 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 IP6K1Q92551 441 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 WNT10AQ9GZT5 417 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 DUSP15Q9H1R2 295 aaPredicted RBP5.62□□□□□ -1.51
YBX3-205ENST00000536107 ADAM7Q9H2U9 754 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 TRIT1Q9H3H1 467 aaKnown RBP5.62□□□□□ -1.51
YBX3-205ENST00000536107 EGFL7Q9UHF1 273 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 ASAP1Q9ULH1 1129 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 AKAP2Q9Y2D5 859 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 PCDH11XQ9BZA7 1347 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 PCDH11YQ9BZA8 1340 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 ZNF541Q9H0D2 1346 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 KIF13BQ9NQT8 1826 aa5.62□□□□□ -1.51
YBX3-205ENST00000536107 OR14I1A6ND48 311 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 ADGRB1O14514 1584 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 ICMTO60725 284 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 CST3P01034 146 aaPredicted RBP5.61□□□□□ -1.51
YBX3-205ENST00000536107 AMPHP49418 695 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 HUNKP57058 714 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 KIF23Q02241 960 aaPredicted RBP5.61□□□□□ -1.51
YBX3-205ENST00000536107 CHRNEQ04844 493 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 EGR3Q06889 387 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 CGNL1Q0VF96 1302 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 LRRC14Q15048 493 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 SZT2Q5T011 3432 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 PHLDB3Q6NSJ2 640 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 LLGL2Q6P1M3 1020 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 FBXO46Q6PJ61 603 aaPredicted RBP5.61□□□□□ -1.51
YBX3-205ENST00000536107 HID1Q8IV36 788 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 TIAM2Q8IVF5 1701 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 USHBP1Q8N6Y0 703 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 SYT8Q8NBV8 401 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 SHISA4Q96DD7 197 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 HHIPL1Q96JK4 782 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 BCO2Q9BYV7 579 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 QRICH2Q9H0J4 1663 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 EPB41L4AQ9HCS5 686 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms