RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 VAV1P15498 845 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 FBLN1P23142 703 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 MVKQ03426 396 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 NOL9Q5SY16 702 aaKnown RBP5.54□□□□□ -1.52
USP48-215ENST00000534705 HLA-DQA1Q5Y7H0 255 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 HEATR6Q6AI08 1181 aaKnown RBP5.54□□□□□ -1.52
USP48-215ENST00000534705 CRTC3Q6UUV7 619 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 FIBCD1Q8N539 461 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 JMJD8Q96S16 334 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 MRIQ9BWK5 157 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 SLITRK6Q9H5Y7 841 aa5.54□□□□□ -1.52
USP48-215ENST00000534705 DIS3Q9Y2L1 958 aaKnown RBP5.54□□□□□ -1.52
USP48-215ENST00000534705 ANKRD34BA5PLL1 514 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 DBHP09172 617 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 C6P13671 934 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
USP48-215ENST00000534705 GRB10Q13322 594 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 NAALADL2Q58DX5 795 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 CWF19L1Q69YN2 538 aaKnown RBP5.53□□□□□ -1.52
USP48-215ENST00000534705 CHST13Q8NET6 341 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 RCC1LQ96I51 464 aaKnown RBP5.53□□□□□ -1.52
USP48-215ENST00000534705 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 ZNF408Q9H9D4 720 aa5.53□□□□□ -1.52
USP48-215ENST00000534705 H0Y8X5 98 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 PPM1BO75688 479 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 PLATP00750 562 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 EPHX1P07099 455 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 TACR2P21452 398 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 SARSP49591 514 aaKnown RBP5.52□□□□□ -1.53
USP48-215ENST00000534705 RBM10P98175 930 aaKnown RBP5.52□□□□□ -1.53
USP48-215ENST00000534705 KIAA1211LQ6NV74 962 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 USP51Q70EK9 711 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 JAMLQ86YT9 394 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 CRACR2BQ8N4Y2 399 aaPredicted RBP5.52□□□□□ -1.53
USP48-215ENST00000534705 DVL3Q92997 716 aaPredicted RBP5.52□□□□□ -1.53
USP48-215ENST00000534705 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 SLC12A9Q9BXP2 914 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 FAM86C1Q9NVL1 165 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 PCDHB10Q9UN67 800 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 MINPP1Q9UNW1 487 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 MRVI1Q9Y6F6 885 aa5.52□□□□□ -1.53
USP48-215ENST00000534705 MEIS1O00470 390 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 ETFBP38117 255 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 NOP2P46087 812 aaKnown RBP5.51□□□□□ -1.53
USP48-215ENST00000534705 CEBPAP49715 358 aaPredicted RBP5.51□□□□□ -1.53
USP48-215ENST00000534705 POU4F1Q01851 419 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 DLX2Q07687 328 aaPredicted RBP5.51□□□□□ -1.53
USP48-215ENST00000534705 FXNQ16595 210 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 RTP2Q5QGT7 225 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 CYP2R1Q6VVX0 501 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 TTLL7Q6ZT98 887 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 ARHGEF39Q8N4T4 335 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 ZNF513Q8N8E2 541 aaPredicted RBP5.51□□□□□ -1.53
USP48-215ENST00000534705 NAT16Q8N8M0 369 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 TMEM52Q8NDY8 209 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 NOL6Q9H6R4 1146 aaKnown RBP5.51□□□□□ -1.53
USP48-215ENST00000534705 PDLIM7Q9NR12 457 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 NTMQ9P121 344 aa5.51□□□□□ -1.53
USP48-215ENST00000534705 CGGBP1Q9UFW8 167 aaPredicted RBP5.51□□□□□ -1.53
USP48-215ENST00000534705 DBR1Q9UK59 544 aaKnown RBP5.51□□□□□ -1.53
USP48-215ENST00000534705 CC2D2AQ9P2K1 1620 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 F8W031 263 aaPredicted RBP5.5□□□□□ -1.53
USP48-215ENST00000534705 PRR5P85299 388 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 BICRALQ6AI39 1079 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 RCSD1Q6JBY9 416 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 B3GNT8Q7Z7M8 397 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 FAM178BQ8IXR5 827 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 BRF1Q92994 677 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 ARMC5Q96C12 935 aa5.5□□□□□ -1.53
USP48-215ENST00000534705 SCAND2PQ9GZW5 306 aaPredicted RBP5.5□□□□□ -1.53
USP48-215ENST00000534705 EIF4G1Q04637 1599 aaKnown RBP5.5□□□□□ -1.53
USP48-215ENST00000534705 FGF10O15520 208 aaPredicted RBP5.49□□□□□ -1.53
USP48-215ENST00000534705 ACVRL1P37023 503 aa5.49□□□□□ -1.53
USP48-215ENST00000534705 CORO7P57737 925 aa5.49□□□□□ -1.53
USP48-215ENST00000534705 LARP1BQ659C4 914 aaKnown RBP5.49□□□□□ -1.53
USP48-215ENST00000534705 POMZP3Q6PJE2 187 aa5.49□□□□□ -1.53
USP48-215ENST00000534705 C6orf15Q6UXA7 325 aaPredicted RBP5.49□□□□□ -1.53
USP48-215ENST00000534705 APBA2Q99767 749 aa5.49□□□□□ -1.53
USP48-215ENST00000534705 EPN3Q9H201 632 aa5.49□□□□□ -1.53
USP48-215ENST00000534705 AURKAO14965 403 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 KLF4O43474 513 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 ASGR2P07307 311 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 KIAA2012Q0VF49 1180 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 TBC1D10BQ4KMP7 808 aaPredicted RBP5.48□□□□□ -1.53
USP48-215ENST00000534705 NBPF6Q5VWK0 638 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 ADAT2Q7Z6V5 191 aaKnown RBP5.48□□□□□ -1.53
USP48-215ENST00000534705 ZNF761Q86XN6 746 aaPredicted RBP5.48□□□□□ -1.53
USP48-215ENST00000534705 ALG3Q92685 438 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 NBPF4Q96M43 638 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 FGD4Q96M96 766 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 ZDHHC15Q96MV8 337 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 FCRL3Q96P31 734 aaPredicted RBP5.48□□□□□ -1.53
USP48-215ENST00000534705 APEX2Q9UBZ4 518 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 EMC9Q9Y3B6 208 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 R3HCC1Q9Y3T6 440 aaKnown RBP5.48□□□□□ -1.53
USP48-215ENST00000534705 HCFC2Q9Y5Z7 792 aa5.48□□□□□ -1.53
USP48-215ENST00000534705 SUSD5O60279 629 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 FZD7O75084 574 aa5.47□□□□□ -1.53
USP48-215ENST00000534705 SLPIP03973 132 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms