RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 SLFN12Q8IYM2 578 aa17.81■□□□□ 0.44
FOXRED1-207ENST00000527004 NELFBQ8WX92 580 aa17.81■□□□□ 0.44
FOXRED1-207ENST00000527004 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
FOXRED1-207ENST00000527004 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
FOXRED1-207ENST00000527004 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
FOXRED1-207ENST00000527004 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 PSDA5PKW4 1024 aaPredicted RBP17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 MARCH6O60337 910 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 FILIP1LQ4L180 1135 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 COBLL1Q53SF7 1204 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 CNNM4Q6P4Q7 775 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 SPICE1Q8N0Z3 855 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 DHTKD1Q96HY7 919 aaPredicted RBP17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 PNMA5Q96PV4 448 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 KCNMB3Q9NPA1 279 aa17.8■□□□□ 0.44
FOXRED1-207ENST00000527004 PVALEFA0A1B0GWK0 134 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 TPM2P07951 284 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 SREBF1P36956 1147 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 ARHGAP4P98171 946 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 Q4G0T1 1027 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 TMEM119Q4V9L6 283 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 HSP90AA4PQ58FG1 418 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 HYIQ5T013 277 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 MIGA2Q7L4E1 593 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 SNX29Q8TEQ0 813 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 LARP4BQ92615 738 aaKnown RBP17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 BLOC1S4Q9NUP1 217 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 ADD3Q9UEY8 706 aaKnown RBP17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 LIMA1Q9UHB6 759 aaKnown RBP17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 GDAQ9Y2T3 454 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 PSMA7O14818 248 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 CIITAP33076 1130 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 RASA3Q14644 834 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 USH1GQ495M9 461 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 KIAA1755Q5JYT7 1200 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 FAM83BQ5T0W9 1011 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 ANKRD20A12PQ8NF67 263 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 NT5C3AQ9H0P0 336 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 RANBP17Q9H2T7 1088 aaKnown RBP17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 TMX1Q9H3N1 280 aa17.79■□□□□ 0.44
FOXRED1-207ENST00000527004 KDM3AQ9Y4C1 1321 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 POTEMA6NI47 508 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 FZD9O00144 591 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 CYP3A4P08684 503 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 SNAP25P60880 206 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 R3HDM1Q15032 1099 aaKnown RBP17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 CDAN1Q8IWY9 1227 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 RAD54LQ92698 747 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 EXOC1Q9NV70 894 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 PPP1R1BQ9UD71 204 aaPredicted RBP17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 FEM1BQ9UK73 627 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 BCS1LQ9Y276 419 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 STK24Q9Y6E0 443 aa17.78■□□□□ 0.44
FOXRED1-207ENST00000527004 BRCA1P38398 1863 aaKnown RBP17.77■□□□□ 0.44
FOXRED1-207ENST00000527004 PHF20L1A8MW92 1017 aa17.77■□□□□ 0.44
FOXRED1-207ENST00000527004 OPLAHO14841 1288 aa17.77■□□□□ 0.44
FOXRED1-207ENST00000527004 ASIC1P78348 528 aa17.77■□□□□ 0.44
FOXRED1-207ENST00000527004 PDE4DQ08499 809 aa17.77■□□□□ 0.44
FOXRED1-207ENST00000527004 NOC3LQ8WTT2 800 aaKnown RBP17.77■□□□□ 0.44
FOXRED1-207ENST00000527004 TEPSINQ96N21 525 aa17.77■□□□□ 0.44
FOXRED1-207ENST00000527004 UNC13DQ70J99 1090 aa17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 CCAR2Q8N163 923 aaKnown RBP17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 BICDL2A1A5D9 508 aa17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 PBX1P40424 430 aa17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 TCP11X2Q5H9J9 407 aa17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 FAM20AQ96MK3 541 aa17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 P2RX7Q99572 595 aaKnown RBP17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 NUDT12Q9BQG2 462 aa17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 THAP9Q9H5L6 903 aa17.76■□□□□ 0.43
FOXRED1-207ENST00000527004 ITIH6Q6UXX5 1313 aa17.75■□□□□ 0.43
FOXRED1-207ENST00000527004 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
FOXRED1-207ENST00000527004 CCP110O43303 1012 aa17.75■□□□□ 0.43
FOXRED1-207ENST00000527004 ETNPPLQ8TBG4 499 aa17.75■□□□□ 0.43
FOXRED1-207ENST00000527004 DEFB129Q9H1M3 183 aa17.75■□□□□ 0.43
FOXRED1-207ENST00000527004 MAPK8IP1Q9UQF2 711 aa17.75■□□□□ 0.43
FOXRED1-207ENST00000527004 MRPL11Q9Y3B7 192 aaKnown RBP17.75■□□□□ 0.43
FOXRED1-207ENST00000527004 MYMKA6NI61 221 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 KCNJ18B7U540 433 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 CCNE1P24864 410 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 EEF1GP26641 437 aaKnown RBP17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 GMPSP49915 693 aaPredicted RBP17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 PSMD2Q13200 908 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 KCNJ12Q14500 433 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 MCM6Q14566 821 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 KRT31Q15323 416 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 FCHSD1Q86WN1 690 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 MICALL2Q8IY33 904 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 LPAR1Q92633 364 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 ABCB11O95342 1321 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 KIF2AO00139 706 aaPredicted RBP17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 TUBB4AP04350 444 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 CCT6AP40227 531 aaKnown RBP17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 STK4Q13043 487 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 E4F1Q66K89 784 aaPredicted RBP17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 HAUS3Q68CZ6 603 aa17.74■□□□□ 0.43
FOXRED1-207ENST00000527004 TTI2Q6NXR4 508 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms