RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FKTNO75072 461 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 HPXP02790 462 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 NOP2P46087 812 aaKnown RBP6.23□□□□□ -1.41
USP48-211ENST00000526044 CHRNEQ04844 493 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 FXNQ16595 210 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 LARP1BQ659C4 914 aaKnown RBP6.23□□□□□ -1.41
USP48-211ENST00000526044 CRTC3Q6UUV7 619 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.23□□□□□ -1.41
USP48-211ENST00000526044 LINC01599Q8WXQ3 324 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 MYLIPQ8WY64 445 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 NOL6Q9H6R4 1146 aaKnown RBP6.23□□□□□ -1.41
USP48-211ENST00000526044 PIK3C2BO00750 1634 aa6.23□□□□□ -1.41
USP48-211ENST00000526044 MYO5BQ9ULV0 1848 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 TMEM82A0PJX8 343 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 FITM1A5D6W6 292 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 H0Y8X5 98 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 ZNF205O95201 554 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 NAT2P11245 290 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 ZNF143P52747 638 aaPredicted RBP6.22□□□□□ -1.41
USP48-211ENST00000526044 POU4F1Q01851 419 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 LILRA6Q6PI73 481 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 ANKS3Q6ZW76 656 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 ZSWIM9Q86XI8 627 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 FAM178BQ8IXR5 827 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 ANKS4BQ8N8V4 417 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 ABHD4Q8TB40 342 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 FGD4Q96M96 766 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 APBA2Q99767 749 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 G6PC3Q9BUM1 346 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 TANGO6Q9C0B7 1094 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 SUSD2Q9UGT4 822 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 EBF1Q9UH73 591 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 EID1Q9Y6B2 187 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 SPATA31E1Q6ZUB1 1445 aa6.22□□□□□ -1.41
USP48-211ENST00000526044 TMEM131LA2VDJ0 1609 aa6.21□□□□□ -1.41
USP48-211ENST00000526044 DDAH1O94760 285 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 STK10O94804 968 aaKnown RBP6.21□□□□□ -1.42
USP48-211ENST00000526044 ATP2B1P20020 1258 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 ERVFC1P60507 584 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 MESP2Q0VG99 397 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 PPP2R5DQ14738 602 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 NR0B2Q15466 257 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 TMEM67Q5HYA8 995 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 C6orf15Q6UXA7 325 aaPredicted RBP6.21□□□□□ -1.42
USP48-211ENST00000526044 ZPBP2Q6X784 338 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 ANKLE2Q86XL3 938 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 LILRA2Q8N149 483 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 ADCY4Q8NFM4 1077 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 RCC1LQ96I51 464 aaKnown RBP6.21□□□□□ -1.42
USP48-211ENST00000526044 MAP6Q96JE9 813 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 CDADC1Q9BWV3 514 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 SLC12A9Q9BXP2 914 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 SUGT1Q9Y2Z0 365 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 UHRF1BP1Q6BDS2 1440 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 UBR1Q8IWV7 1749 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 A2ML1A8K2U0 1454 aa6.21□□□□□ -1.42
USP48-211ENST00000526044 KDM5AP29375 1690 aaKnown RBP6.2□□□□□ -1.42
USP48-211ENST00000526044 NEURL4Q96JN8 1562 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 EIF5BO60841 1220 aaKnown RBP6.2□□□□□ -1.42
USP48-211ENST00000526044 IGSF3O75054 1194 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 GLI1P08151 1106 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 GSTM1P09488 218 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 KIR2DL1P43626 348 aaPredicted RBP6.2□□□□□ -1.42
USP48-211ENST00000526044 KIR2DL2P43627 348 aaPredicted RBP6.2□□□□□ -1.42
USP48-211ENST00000526044 MLANAQ16655 118 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 ARHGEF39Q8N4T4 335 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 HNRNPLLQ8WVV9 542 aaKnown RBP6.2□□□□□ -1.42
USP48-211ENST00000526044 FCRL2Q96LA5 508 aaPredicted RBP6.2□□□□□ -1.42
USP48-211ENST00000526044 AP5S1Q9NUS5 200 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 TNFRSF10DQ9UBN6 386 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 MYO3AQ8NEV4 1616 aa6.2□□□□□ -1.42
USP48-211ENST00000526044 TMEM2Q9UHN6 1383 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 CEP170BQ9Y4F5 1589 aaPredicted RBP6.19□□□□□ -1.42
USP48-211ENST00000526044 RIMS2Q9UQ26 1411 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 PRRG2O14669 202 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 KLF4O43474 513 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 TRHRP34981 398 aaPredicted RBP6.19□□□□□ -1.42
USP48-211ENST00000526044 SNX17Q15036 470 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 SLC14A2Q15849 920 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 RTP2Q5QGT7 225 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 SIAH1Q8IUQ4 282 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 ZNF513Q8N8E2 541 aaPredicted RBP6.19□□□□□ -1.42
USP48-211ENST00000526044 MICAL1Q8TDZ2 1067 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 FCRL3Q96P31 734 aaPredicted RBP6.19□□□□□ -1.42
USP48-211ENST00000526044 C19orf44Q9H6X5 657 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 SP110Q9HB58 689 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 PPP1R1BQ9UD71 204 aaPredicted RBP6.19□□□□□ -1.42
USP48-211ENST00000526044 CGGBP1Q9UFW8 167 aaPredicted RBP6.19□□□□□ -1.42
USP48-211ENST00000526044 AKT3Q9Y243 479 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 ADGRF5Q8IZF2 1346 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 ADGRB3O60242 1522 aa6.19□□□□□ -1.42
USP48-211ENST00000526044 PPLO60437 1756 aa6.18□□□□□ -1.42
USP48-211ENST00000526044 B2RBV5 119 aa6.18□□□□□ -1.42
USP48-211ENST00000526044 B8ZZF3 427 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms