RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 UBXN2AP68543 259 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 PRKCZQ05513 592 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 TMEM63BQ5T3F8 832 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 WDR78Q5VTH9 848 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 NSMFQ6X4W1 530 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 PLEKHH3Q7Z736 793 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 MB21D1Q8N884 522 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 SYTL5Q8TDW5 730 aaPredicted RBP7.48□□□□□ -1.21
CD44-214ENST00000525211 LZTS2Q9BRK4 669 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 AMNQ9BXJ7 453 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 NPDC1Q9NQX5 325 aaPredicted RBP7.48□□□□□ -1.21
CD44-214ENST00000525211 SAGE1Q9NXZ1 904 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 CYP39A1Q9NYL5 469 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 STK36Q9NRP7 1315 aa7.48□□□□□ -1.21
CD44-214ENST00000525211 CENPFP49454 3210 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 MYH6P13533 1939 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 CCDC196A0A1B0GTZ2 297 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 SMCO2A6NFE2 343 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 FKTNO75072 461 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 DEXIO95424 95 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 CFBP00751 764 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 IGHA2P01877 340 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 CYP2B6P20813 491 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 CALML3P27482 149 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 ADORA2AP29274 412 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 MCM2P49736 904 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 CLK2P49760 499 aaKnown RBP7.47□□□□□ -1.21
CD44-214ENST00000525211 HSD17B4P51659 736 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 OAZ1P54368 228 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 NAPAP54920 295 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 RPS6P62753 249 aaKnown RBP7.47□□□□□ -1.21
CD44-214ENST00000525211 NR5A1Q13285 461 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 GRB14Q14449 540 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 PPP2R5BQ15173 497 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 TSR1Q2NL82 804 aaKnown RBP7.47□□□□□ -1.21
CD44-214ENST00000525211 ZNF792Q3KQV3 632 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 PRAMEF19Q5SWL8 479 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 KRT40Q6A162 431 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 OTOP1Q7RTM1 612 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 HSCBQ8IWL3 235 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 FAM133AQ8N9E0 248 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 SHCBP1Q8NEM2 672 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 TNFRSF25Q93038 417 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 MMP19Q99542 508 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 PHF20Q9BVI0 1012 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 KDM4CQ9H3R0 1056 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 SCUBE2Q9NQ36 999 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 BIN2Q9UBW5 565 aaPredicted RBP7.47□□□□□ -1.21
CD44-214ENST00000525211 TELO2Q9Y4R8 837 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 CTDP1Q9Y5B0 961 aaPredicted RBP7.47□□□□□ -1.21
CD44-214ENST00000525211 ABCB11O95342 1321 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 MGAMO43451 1857 aa7.47□□□□□ -1.21
CD44-214ENST00000525211 ZNFX1Q9P2E3 1918 aaKnown RBP7.46□□□□□ -1.21
CD44-214ENST00000525211 BTBD18B2RXH4 712 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 SLC25A27O95847 323 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 FDX1P10109 184 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 ELNP15502 786 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 DDIT3P35638 169 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 FLT3LGP49771 235 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 GHRHRQ02643 423 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 TKFCQ3LXA3 575 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.22
CD44-214ENST00000525211 JAKMIP3Q5VZ66 844 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 GPR153Q6NV75 609 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 FAM173BQ6P4H8 233 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 MAMSTRQ6ZN01 415 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 TRPV1Q8NER1 839 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 CHST13Q8NET6 341 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 GTF3C2Q8WUA4 911 aaPredicted RBP7.46□□□□□ -1.22
CD44-214ENST00000525211 FOXD4L4Q8WXT5 416 aaPredicted RBP7.46□□□□□ -1.22
CD44-214ENST00000525211 TRIB2Q92519 343 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 LLPHQ9BRT6 129 aaKnown RBP7.46□□□□□ -1.22
CD44-214ENST00000525211 ZMYND12Q9H0C1 365 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 BCAS3Q9H6U6 928 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 ACAD9Q9H845 621 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 PSTPIP2Q9H939 334 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 RIC8AQ9NPQ8 531 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 SEC63Q9UGP8 760 aaKnown RBP7.46□□□□□ -1.22
CD44-214ENST00000525211 PCDHA6Q9UN73 950 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 SMC3Q9UQE7 1217 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 ZDHHC9Q9Y397 364 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 MRPL11Q9Y3B7 192 aaKnown RBP7.46□□□□□ -1.22
CD44-214ENST00000525211 PCDHA8Q9Y5H6 950 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 PTCH2Q9Y6C5 1203 aa7.46□□□□□ -1.22
CD44-214ENST00000525211 SLC15A5A6NIM6 579 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 TNPO2O14787 897 aaKnown RBP7.45□□□□□ -1.22
CD44-214ENST00000525211 ADCY6O43306 1168 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 RGS20O76081 388 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 SNAI1O95863 264 aaPredicted RBP7.45□□□□□ -1.22
CD44-214ENST00000525211 EIF2AK2P19525 551 aaKnown RBP7.45□□□□□ -1.22
CD44-214ENST00000525211 MAPK4P31152 587 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 CYP2C19P33261 490 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 ADCY7P51828 1080 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 NLRP5P59047 1200 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 MRPS9P82933 396 aaKnown RBP7.45□□□□□ -1.22
CD44-214ENST00000525211 RNF207Q6ZRF8 634 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 TRIM22Q8IYM9 498 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 TNS4Q8IZW8 715 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms