RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	CYFIP2	Q96F07	1278 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	SELENOO	Q9BVL4	669 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZC3H12C	Q9C0D7	883 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	XPO4	Q9C0E2	1151 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	SAMSN1	Q9NSI8	373 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	3e-7	■■■■□ 25.1
FAM49B-225	ENST00000523288	TUBE1	Q9UJT0	475 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	C2CD2	Q9Y426	696 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	NFE2L3	Q9Y4A8	694 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	USP16	Q9Y5T5	823 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	BZW2	Q9Y6E2	419 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	NUMBL	Q9Y6R0	609 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	MARF1	Q9Y4F3	1742 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	MKI67	P46013	3256 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TESPA1	A2RU30	521 aa	Predicted RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRAPPC3	O43617	180 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	IDH3B	O43837	385 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	PSMA5	P28066	241 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	ADAM9	Q13443	819 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	MAP7	Q14244	749 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	GALNTL6	Q49A17	601 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	ACCSL	Q4AC99	568 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCDC152	Q4G0S7	254 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TMEM259	Q4ZIN3	620 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TTMP	Q5BVD1	217 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	LDHAL6A	Q6ZMR3	332 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	SLC15A3	Q8IY34	581 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	PEX5L	Q8IYB4	626 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRIM22	Q8IYM9	498 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	PGBD1	Q96JS3	809 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	NR1H4	Q96RI1	486 aa	Predicted RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TUBGCP5	Q96RT8	1024 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCT8L2	Q96SF2	557 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	LSG1	Q9H089	658 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	HSD3B7	Q9H2F3	369 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	CNOT10	Q9H9A5	744 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	IL1RAPL2	Q9NP60	686 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	EXOC1	Q9NV70	894 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	PCDHB2	Q9Y5E7	798 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	SNX14	Q9Y5W7	946 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	XIRP1	Q702N8	1843 aa	Known RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TMEM247	A6NEH6	219 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZNF189	O75820	626 aa	Predicted RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	SKI	P12755	728 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	SLC5A1	P13866	664 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	GNG11	P61952	73 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	PDE4B	Q07343	736 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	ITGA9	Q13797	1035 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCDC153	Q494R4	210 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZNF394	Q53GI3	561 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	BOLA3	Q53S33	107 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	EAPP	Q56P03	285 aa	Predicted RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	AKNAD1	Q5T1N1	836 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRAPPC3L	Q5T215	181 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	PACS1	Q6VY07	963 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	GET4	Q7L5D6	327 aa	Predicted RBP	4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	FAM186B	Q8IYM0	893 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZNF280C	Q8ND82	737 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	PHC3	Q8NDX5	983 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	TIMMDC1	Q9NPL8	285 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	HAUS2	Q9NVX0	235 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	BCS1L	Q9Y276	419 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	NFAT5	O94916	1531 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	NRXN3	Q9Y4C0	1643 aa		4.24	□□□□□ -1.73
FAM49B-225	ENST00000523288	NEDD4	P46934	1319 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	PDS5A	Q29RF7	1337 aa	Known RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	MYPN	Q86TC9	1320 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	N4BP3	O15049	544 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	FIBP	O43427	364 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	ORC4	O43929	436 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	PARP1	P09874	1014 aa	Known RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	POLR2E	P19388	210 aa	Known RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	PDE1A	P54750	535 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	FANCC	Q00597	558 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	ITGB3BP	Q13352	177 aa	Predicted RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	BIRC3	Q13489	604 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	NFE2L2	Q16236	605 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	PARP6	Q2NL67	630 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	THOC7	Q6I9Y2	204 aa	Known RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	TPTE2	Q6XPS3	522 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	HNRNPAB	Q99729	332 aa	Known RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	SLF1	Q9BQI6	1058 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRAIP	Q9BWF2	469 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	QTRT2	Q9H974	415 aa	Known RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	GDPD2	Q9HCC8	539 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	STIM2	Q9P246	746 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	LARS	Q9P2J5	1176 aa	Known RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	HIP1	O00291	1037 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	RIMBP2	O15034	1052 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	NR1I2	O75469	434 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	ZNF202	O95125	648 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	MME	P08473	750 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	CCNB1	P14635	433 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	SP100	P23497	879 aa	Predicted RBP	4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	GBP1	P32455	592 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	VAV2	P52735	878 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	SLC39A6	Q13433	755 aa		4.23	□□□□□ -1.73
FAM49B-225	ENST00000523288	TRIM14	Q14142	442 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms