RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 NID1P14543 1247 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 MAPK8P45983 427 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 FKBP1AP62942 108 aaKnown RBP8.08□□□□□ -1.12
VPS13B-211ENST00000522802 PPIL2Q13356 520 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 MOGSQ13724 837 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 ERO1BQ86YB8 467 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 TDHQ8IZJ6 230 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
VPS13B-211ENST00000522802 OSMRQ99650 979 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
VPS13B-211ENST00000522802 PNNQ9H307 717 aaKnown RBP8.08□□□□□ -1.12
VPS13B-211ENST00000522802 PAK6Q9NQU5 681 aaPredicted RBP8.08□□□□□ -1.12
VPS13B-211ENST00000522802 MAST2Q6P0Q8 1798 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 DOCK3Q8IZD9 2030 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 A0A1W2PP55 124 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 ELL2O00472 640 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 ADCY3O60266 1144 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 SMNDC1O75940 238 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 TFRCP02786 760 aaKnown RBP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 CYP2C8P10632 490 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 HOXD10P28358 340 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 FCGRTP55899 365 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 MFSD14BQ5SR56 506 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 KIAA0319Q5VV43 1072 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 CEP135Q66GS9 1140 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 C15orf52Q6ZUT6 534 aaKnown RBP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 ZNF804AQ7Z570 1209 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 ANKRD23Q86SG2 305 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 DZIP1LQ8IYY4 767 aaKnown RBP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 TMEM102Q8N9M5 508 aaPredicted RBP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 FAM161BQ96MY7 647 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 MPHOSPH8Q99549 860 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 POP1Q99575 1024 aaKnown RBP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 RAPGEFL1Q9UHV5 662 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 MKL2Q9ULH7 1088 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 TTF2Q9UNY4 1162 aaKnown RBP8.07□□□□□ -1.12
VPS13B-211ENST00000522802 DOCK2Q92608 1830 aa8.07□□□□□ -1.12
VPS13B-211ENST00000522802 LTBP2Q14767 1821 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 FRMPD3Q5JV73 1810 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 PHIPQ8WWQ0 1821 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 AK9Q5TCS8 1911 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 PI4KAP2A4QPH2 592 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 CRKP46108 304 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 FLT3LGP49771 235 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 ALG1LQ6GMV1 187 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 ADAMTSL4Q6UY14 1074 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 PI4KAP1Q8N8J0 262 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
VPS13B-211ENST00000522802 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 TRIM11Q96F44 468 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 NPHS2Q9NP85 383 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 TRIM33Q9UPN9 1127 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 PLXNB2O15031 1838 aa8.06□□□□□ -1.12
VPS13B-211ENST00000522802 FAM205AQ6ZU69 1335 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 DOCK1Q14185 1865 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 PDE2AO00408 941 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-211ENST00000522802 GNB5O14775 395 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 DDX58O95786 925 aaKnown RBP8.05□□□□□ -1.12
VPS13B-211ENST00000522802 PROCP04070 461 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 TNNI2P48788 182 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 CASP7P55210 303 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 NECAB2Q7Z6G3 386 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 FBXO33Q7Z6M2 555 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 CACTIN-AS1Q8N1I8 211 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 FBF1Q8TES7 1133 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 HHIPQ96QV1 700 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 PARK7Q99497 189 aaKnown RBP8.05□□□□□ -1.12
VPS13B-211ENST00000522802 ADAM19Q9H013 955 aa8.05□□□□□ -1.12
VPS13B-211ENST00000522802 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS13B-211ENST00000522802 RPAP1Q9BWH6 1393 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-211ENST00000522802 MYH13Q9UKX3 1938 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 PIK3R2O00459 728 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 LDHBP07195 334 aaKnown RBP8.04□□□□□ -1.12
VPS13B-211ENST00000522802 CSF1RP07333 972 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 ZNF853P0CG23 659 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 GYG1P46976 350 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 PPATQ06203 517 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 GDF6Q6KF10 455 aaPredicted RBP8.04□□□□□ -1.12
VPS13B-211ENST00000522802 KSR2Q6VAB6 950 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 MIGA2Q7L4E1 593 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 CCNJLQ8IV13 435 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 C8orf58Q8NAV2 365 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 TCF12Q99081 682 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 PLA2G12BQ9BX93 195 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 BHLHE41Q9C0J9 482 aaPredicted RBP8.04□□□□□ -1.12
VPS13B-211ENST00000522802 LOC285556D6RIA3 1793 aa8.04□□□□□ -1.12
VPS13B-211ENST00000522802 PFASO15067 1338 aa8.03□□□□□ -1.12
VPS13B-211ENST00000522802 TNPO2O14787 897 aaKnown RBP8.03□□□□□ -1.12
VPS13B-211ENST00000522802 GCKRQ14397 625 aa8.03□□□□□ -1.12
VPS13B-211ENST00000522802 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.124e-9■■■■■ 79.6
VPS13B-211ENST00000522802 PI16Q6UXB8 463 aa8.03□□□□□ -1.12
VPS13B-211ENST00000522802 TDRD7Q8NHU6 1098 aaKnown RBP8.03□□□□□ -1.12
VPS13B-211ENST00000522802 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
VPS13B-211ENST00000522802 ANKRD18BA2A2Z9 1011 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 PLIN1O60240 522 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 ATP2B2Q01814 1243 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 NEXNQ0ZGT2 675 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 G2E3Q7L622 706 aa8.02□□□□□ -1.13
VPS13B-211ENST00000522802 IL22RA1Q8N6P7 574 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms