RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CNNM4Q6P4Q7 775 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 KRT222Q8N1A0 295 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 HAS1Q92839 578 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 AKT1S1Q96B36 256 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 CDK5RAP3Q96JB5 506 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TTYH3Q9C0H2 523 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 AGPAT5Q9NUQ2 364 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 TRIM10Q9UDY6 481 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 C10orf71Q711Q0 1435 aa12.02□□□□□ -0.48
RAB11FIP1-204ENST00000522774 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ZBTB5O15062 677 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 RAD21O60216 631 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 SEC31AO94979 1220 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 NDUFA10O95299 355 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 GPATCH4Q5T3I0 446 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 CUL5Q93034 780 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ZNF622Q969S3 477 aaKnown RBP eCLIP12.02□□□□□ -0.497e-9■□□□□ 10.3
RAB11FIP1-204ENST00000522774 MTMR8Q96EF0 704 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 MASTLQ96GX5 879 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 STK17AQ9UEE5 414 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 EPN1Q9Y6I3 576 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 TBC1D8BQ0IIM8 1120 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PPP4R3AQ6IN85 833 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 UNC13DQ70J99 1090 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 RAD54LQ92698 747 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 DDX25Q9UHL0 483 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 TFR2Q9UP52 801 aa12.02□□□□□ -0.49
RAB11FIP1-204ENST00000522774 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ZRANB2O95218 330 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PDE6BP35913 854 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PDIA5Q14554 519 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 KIF4BQ2VIQ3 1234 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 COBLL1Q53SF7 1204 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 CENPPQ6IPU0 288 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 SH3BP5LQ7L8J4 393 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 GLIS3Q8NEA6 775 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ZDHHC15Q96MV8 337 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PSTPIP2Q9H939 334 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ST7Q9NRC1 585 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L15C9J2P7 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L13C9JLJ4 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L11C9JVI0 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L18D6R9N7 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L22D6RA61 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L17D6RBQ6 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L19D6RCP7 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L20D6RJB6 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PNMA6AP0CW24 399 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 DMTNQ08495 405 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L24Q0WX57 530 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 TMEM119Q4V9L6 283 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 KRT79Q5XKE5 535 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 USP17L6PQ6QN14 398 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 NOC4LQ9BVI4 516 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 EHD4Q9H223 541 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 FAM198AQ9UFP1 575 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 CDC23Q9UJX2 597 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ARFGEF1Q9Y6D6 1849 aa12.01□□□□□ -0.49
RAB11FIP1-204ENST00000522774 CTAGE9A4FU28 777 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 EEF2P13639 858 aaKnown RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 IDEP14735 1019 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 HERVK_113P62684 666 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 QRICH1Q2TAL8 776 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 TMCO3Q6UWJ1 677 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 DDX12PQ92771 950 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 GOLGA1Q92805 767 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 RAB34Q9BZG1 259 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ARGLU1Q9NWB6 273 aaPredicted RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PVALEFA0A1B0GWK0 134 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 TRIM21P19474 475 aaKnown RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PPP1R2P41236 205 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 MRPL12P52815 198 aaKnown RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 BMS1Q14692 1282 aaKnown RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PODNQ7Z5L7 613 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 SRGAP1Q7Z6B7 1085 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 FAM114A1Q8IWE2 563 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ZSCAN29Q8IWY8 852 aaPredicted RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PARD6BQ9BYG5 372 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 GUCA1BQ9UMX6 200 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 RBM5P52756 815 aaKnown RBP eCLIP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 CHMP4BP1P59074 171 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 LRRC41Q15345 812 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 MEA1Q16626 185 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 RABGGTAQ92696 567 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 CCDC17Q96LX7 622 aa12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 NAPGQ99747 312 aaPredicted RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 TMX4Q9H1E5 349 aaPredicted RBP12□□□□□ -0.49
RAB11FIP1-204ENST00000522774 SNAP25P60880 206 aa11.99□□□□□ -0.49
RAB11FIP1-204ENST00000522774 EHHADHQ08426 723 aa11.99□□□□□ -0.49
RAB11FIP1-204ENST00000522774 CERKLQ49MI3 558 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP1-204ENST00000522774 DACT2Q5SW24 774 aa11.99□□□□□ -0.49
RAB11FIP1-204ENST00000522774 SIAH1Q8IUQ4 282 aa11.99□□□□□ -0.49
RAB11FIP1-204ENST00000522774 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP1-204ENST00000522774 ERCC3P19447 782 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms