RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 F11P03951 625 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 RAG1P15918 1043 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 ITGA6P23229 1130 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 FPGSQ05932 587 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 TCP10Q12799 353 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 SFSWAPQ12872 951 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 CCL14Q16627 93 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 NOL9Q5SY16 702 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 TREML2Q5T2D2 321 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 GJC2Q5T442 439 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 PEAR1Q5VY43 1037 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 SLC39A5Q6ZMH5 540 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 HS2ST1Q7LGA3 356 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 KRT25Q7Z3Z0 450 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 FAM83AQ86UY5 434 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 CCAR1Q8IX12 1150 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 SOCS4Q8WXH5 440 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 TEKT1Q969V4 418 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 SUV39H2Q9H5I1 410 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 CWC22Q9HCG8 908 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 HYPKQ9NX55 129 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 GGT7Q9UJ14 662 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 AGTPBP1Q9UPW5 1226 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 LAS1LQ9Y4W2 734 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 MYH2Q9UKX2 1941 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 CDK5RAP2Q96SN8 1893 aa6.28□□□□□ -1.4
CTNNA1-232ENST00000522013 CHD9Q3L8U1 2897 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 A0A1W2PP55 124 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 SOBPA7XYQ1 873 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 PI4K2BG5E9Z4 385 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 EFSO43281 561 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 DGAT1O75907 488 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 PTPRAP18433 802 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 CES1P23141 567 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 ITGB8P26012 769 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 TARSP26639 723 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 GCLCP48506 637 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 ST13P50502 369 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 CHAF1AQ13111 956 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 UBAP2LQ14157 1087 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 ERMP1Q7Z2K6 904 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 NLRP8Q86W28 1048 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 SCYL3Q8IZE3 742 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 C3orf58Q8NDZ4 430 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 DHX38Q92620 1227 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 LPAR1Q92633 364 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 NKX2-4Q9H2Z4 354 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 ZFATQ9P243 1243 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 DDX20Q9UHI6 824 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 MSRAQ9UJ68 235 aa6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 PTPRZ1P23471 2315 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-232ENST00000522013 MYBBP1AQ9BQG0 1328 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 DCDC2BA2VCK2 349 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 ERC2O15083 957 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 MSCO60682 206 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 MMP20O60882 483 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 CLTBP09497 229 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 ACPPP15309 386 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 DNAJA1P31689 397 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 RGS2P41220 211 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 MAP3K10Q02779 954 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 GRIK5Q16478 980 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 ANO1Q5XXA6 986 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 C15orf52Q6ZUT6 534 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 CCDC84Q86UT8 332 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 ZNF654Q8IZM8 581 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 FAM177A1Q8N128 213 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 PGBD3Q8N328 593 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 FERMT2Q96AC1 680 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 CNTNAP3BQ96NU0 1288 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 DNAJC2Q99543 621 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 APBA2Q99767 749 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 CNTNAP3Q9BZ76 1288 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 GSX2Q9BZM3 304 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 PHAXQ9H814 394 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 SLC28A3Q9HAS3 691 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 ZNF112Q9UJU3 913 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 INPP5FQ9Y2H2 1132 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 AFG3L2Q9Y4W6 797 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 TACC3Q9Y6A5 838 aa6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 COL4A4P53420 1690 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-232ENST00000522013 ZNFX1Q9P2E3 1918 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 F6X3S4 739 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 PEX10O60683 326 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 PQBP1O60828 265 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 FRAT2O75474 233 aaPredicted RBP6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 FAM157BP0CG42 384 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 XRCC5P13010 732 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 GYG1P46976 350 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 TLE2Q04725 743 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 RAB30Q15771 203 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 WDR78Q5VTH9 848 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 TTC39BQ5VTQ0 682 aaPredicted RBP6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 KIAA0319Q5VV43 1072 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 MFSD14CQ5VZR4 134 aa6.25□□□□□ -1.41
CTNNA1-232ENST00000522013 UBE3BQ7Z3V4 1068 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms