RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 E7EWF7 191 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 ZBTB5O15062 677 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 B4GALT4O60513 344 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 CFBP00751 764 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 WTAPQ15007 396 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 ARHGEF16Q5VV41 709 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 COPS5Q92905 334 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 IWS1Q96ST2 819 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 MTG1Q9BT17 334 aaPredicted RBP18.41■□□□□ 0.54
CLN8-205ENST00000520991 ALDH8A1Q9H2A2 487 aaPredicted RBP18.41■□□□□ 0.54
CLN8-205ENST00000520991 COL20A1Q9P218 1284 aa18.41■□□□□ 0.54
CLN8-205ENST00000520991 PALM3A6NDB9 673 aaPredicted RBP18.4■□□□□ 0.54
CLN8-205ENST00000520991 GRM4Q14833 912 aa18.4■□□□□ 0.54
CLN8-205ENST00000520991 STXBP2Q15833 593 aa18.4■□□□□ 0.54
CLN8-205ENST00000520991 PSRC1Q6PGN9 363 aaPredicted RBP18.4■□□□□ 0.54
CLN8-205ENST00000520991 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
CLN8-205ENST00000520991 CHST3Q7LGC8 479 aa18.4■□□□□ 0.54
CLN8-205ENST00000520991 HOMER1Q86YM7 354 aa18.4■□□□□ 0.54
CLN8-205ENST00000520991 SEMA6BQ9H3T3 888 aa18.4■□□□□ 0.54
CLN8-205ENST00000520991 RBM8AQ9Y5S9 174 aaKnown RBP18.4■□□□□ 0.54
CLN8-205ENST00000520991 TAF6LQ9Y6J9 622 aa18.4■□□□□ 0.54
CLN8-205ENST00000520991 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.39■□□□□ 0.53
CLN8-205ENST00000520991 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.39■□□□□ 0.53
CLN8-205ENST00000520991 KPNA6O60684 536 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 ARIH2O95376 493 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 ACRP10323 421 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 EIF2AK2P19525 551 aaKnown RBP18.39■□□□□ 0.53
CLN8-205ENST00000520991 FAM47CQ5HY64 1035 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 TMEM240Q5SV17 173 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 STOX1Q6ZVD7 989 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 MTMR8Q96EF0 704 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 IL23AQ9NPF7 189 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 PCDHA1Q9Y5I3 950 aa18.39■□□□□ 0.53
CLN8-205ENST00000520991 UMODL1Q5DID0 1318 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 A6NJR5 290 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 SUPT20HL2P0C7V6 817 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 CCL23P55773 120 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 TRAF1Q13077 416 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 CATIPQ7Z7H3 387 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 NOC4LQ9BVI4 516 aaKnown RBP18.38■□□□□ 0.53
CLN8-205ENST00000520991 SENP2Q9HC62 589 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 PXMP2Q9NR77 195 aa18.38■□□□□ 0.53
CLN8-205ENST00000520991 TRMT13Q9NUP7 481 aaKnown RBP18.38■□□□□ 0.53
CLN8-205ENST00000520991 PPP1R11O60927 126 aaPredicted RBP18.37■□□□□ 0.53
CLN8-205ENST00000520991 GH1P01241 217 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 DNAJB2P25686 324 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 HSD17B4P51659 736 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 LY6KQ17RY6 165 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 CCDC62Q6P9F0 684 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 PIGSQ96S52 555 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 CDX2Q99626 313 aaPredicted RBP18.37■□□□□ 0.53
CLN8-205ENST00000520991 MTIF3Q9H2K0 278 aaKnown RBP18.37■□□□□ 0.53
CLN8-205ENST00000520991 TTYH1Q9H313 450 aaPredicted RBP18.37■□□□□ 0.53
CLN8-205ENST00000520991 CDH23Q9H251 3354 aa18.37■□□□□ 0.53
CLN8-205ENST00000520991 TMEM265A0A087WTH1 108 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 OPLAHO14841 1288 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 NR3C2P08235 984 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 TROAPQ12815 778 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
CLN8-205ENST00000520991 AFG1LQ8WV93 481 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 RIOX1Q9H6W3 641 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 MAP3K20Q9NYL2 800 aaKnown RBP18.36■□□□□ 0.53
CLN8-205ENST00000520991 MRVI1Q9Y6F6 885 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 A0A0C4DFX4 3053 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 EYSQ5T1H1 3165 aa18.36■□□□□ 0.53
CLN8-205ENST00000520991 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
CLN8-205ENST00000520991 FGBP02675 491 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 CYP2C9P11712 490 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 HOXA13P31271 388 aaPredicted RBP18.35■□□□□ 0.53
CLN8-205ENST00000520991 ANTXR2P58335 489 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 GHRHRQ02643 423 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 ARHGAP1Q07960 439 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 RASIP1Q5U651 963 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 NFRKBQ6P4R8 1299 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 IGDCC4Q8TDY8 1250 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 WNT8AQ9H1J5 351 aa18.35■□□□□ 0.53
CLN8-205ENST00000520991 PNMA6FA0A0J9YX94 578 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 MMP3P08254 477 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 MYCLP12524 364 aaPredicted RBP18.34■□□□□ 0.53
CLN8-205ENST00000520991 SLC35G1Q2M3R5 365 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 RPUSD2Q8IZ73 545 aaKnown RBP18.34■□□□□ 0.53
CLN8-205ENST00000520991 PPP1R13LQ8WUF5 828 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 MYLIPQ8WY64 445 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 HERVK_113Q902F9 699 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 TIFAQ96CG3 184 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 SCLYQ96I15 445 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 PDCD2LQ9BRP1 358 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 ESYT1Q9BSJ8 1104 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 NOD1Q9Y239 953 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 SCN10AQ9Y5Y9 1956 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 KIAA1217Q5T5P2 1943 aa18.34■□□□□ 0.53
CLN8-205ENST00000520991 UNC80Q8N2C7 3258 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms