RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 STXBP2Q15833 593 aa18.76■□□□□ 0.59
IGHV3-42-201ENST00000520410 PSRC1Q6PGN9 363 aaPredicted RBP18.76■□□□□ 0.59
IGHV3-42-201ENST00000520410 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
IGHV3-42-201ENST00000520410 NFXL1Q6ZNB6 911 aa18.76■□□□□ 0.59
IGHV3-42-201ENST00000520410 CATIPQ7Z7H3 387 aa18.76■□□□□ 0.59
IGHV3-42-201ENST00000520410 NOD1Q9Y239 953 aa18.76■□□□□ 0.59
IGHV3-42-201ENST00000520410 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
IGHV3-42-201ENST00000520410 MYCLP12524 364 aaPredicted RBP18.75■□□□□ 0.59
IGHV3-42-201ENST00000520410 FAM109BQ6ICB4 259 aaPredicted RBP18.75■□□□□ 0.59
IGHV3-42-201ENST00000520410 RGS22Q8NE09 1264 aa18.75■□□□□ 0.59
IGHV3-42-201ENST00000520410 COL20A1Q9P218 1284 aa18.75■□□□□ 0.59
IGHV3-42-201ENST00000520410 MAD2L2Q9UI95 211 aa18.75■□□□□ 0.59
IGHV3-42-201ENST00000520410 PCDHA1Q9Y5I3 950 aa18.75■□□□□ 0.59
IGHV3-42-201ENST00000520410 TAF6LQ9Y6J9 622 aa18.75■□□□□ 0.59
IGHV3-42-201ENST00000520410 UMODL1Q5DID0 1318 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 RBM47A0AV96 593 aaKnown RBP18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 ZBTB5O15062 677 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 CD4P01730 458 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 EDNRBP24530 442 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 PURAQ00577 322 aaKnown RBP18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 GRM4Q14833 912 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 LY6KQ17RY6 165 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 GUCD1Q96NT3 240 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 PIGSQ96S52 555 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 SEZ6LQ9BYH1 1024 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 MTIF3Q9H2K0 278 aaKnown RBP18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 TRMT13Q9NUP7 481 aaKnown RBP18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 MRVI1Q9Y6F6 885 aa18.74■□□□□ 0.59
IGHV3-42-201ENST00000520410 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 ZBBXA8MT70 800 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 SORBS3O60504 671 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 ARIH2O95376 493 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 GH1P01241 217 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 SUPT20HL2P0C7V6 817 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 CYP2C9P11712 490 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 HOXA13P31271 388 aaPredicted RBP18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 STOX1Q6ZVD7 989 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 ZNF365Q70YC5 407 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 FCHSD1Q86WN1 690 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 SLC43A3Q8NBI5 491 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 SENP2Q9HC62 589 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 IL23AQ9NPF7 189 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 GRIN2DO15399 1336 aa18.73■□□□□ 0.59
IGHV3-42-201ENST00000520410 TRAF1Q13077 416 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 NBPF20Q3BBV1 942 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 TMEM240Q5SV17 173 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 MYLIPQ8WY64 445 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 SCLYQ96I15 445 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 IWS1Q96ST2 819 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 CDX2Q99626 313 aaPredicted RBP18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 MYL10Q9BUA6 226 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 SEMA6BQ9H3T3 888 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 PXMP2Q9NR77 195 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 MYH6P13533 1939 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 DNAH12Q6ZR08 3092 aa18.72■□□□□ 0.59
IGHV3-42-201ENST00000520410 PALM3A6NDB9 673 aaPredicted RBP18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 PRC1O43663 620 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 KPNA6O60684 536 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 FGBP02675 491 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 FOSL2P15408 326 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 DNAJB2P25686 324 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 OTOP2Q7RTS6 562 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 MAP4K1Q92918 833 aa18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 NOC4LQ9BVI4 516 aaKnown RBP18.71■□□□□ 0.59
IGHV3-42-201ENST00000520410 GRXCR1A8MXD5 290 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 GCOM1H8Y6P7 765 aaPredicted RBP18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 PPP1R11O60927 126 aaPredicted RBP18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 NR3C2P08235 984 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 MMP3P08254 477 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 POLR2MP0CAP2 368 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 DEFB128Q7Z7B8 93 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 RETREG2Q8NC44 543 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 TIFAQ96CG3 184 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 ZFP91Q96JP5 570 aaPredicted RBP18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 MAF1Q9H063 256 aa18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 SEC63Q9UGP8 760 aaKnown RBP18.7■□□□□ 0.58
IGHV3-42-201ENST00000520410 A6NJR5 290 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 EIF3JO75822 258 aaKnown RBP18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 KIF5BP33176 963 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 ANTXR2P58335 489 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 C16orf59Q7L2K0 433 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 RAB11FIP4Q86YS3 637 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 DHX37Q8IY37 1157 aaKnown RBP18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 MB21D2Q8IYB1 491 aaPredicted RBP18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 RPUSD2Q8IZ73 545 aaKnown RBP18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 ESYT1Q9BSJ8 1104 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 WNT8AQ9H1J5 351 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 TTYH1Q9H313 450 aaPredicted RBP18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 SZT2Q5T011 3432 aa18.69■□□□□ 0.58
IGHV3-42-201ENST00000520410 PNMA6FA0A0J9YX94 578 aa18.68■□□□□ 0.58
IGHV3-42-201ENST00000520410 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms