RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 USP17L15C9J2P7 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L13C9JLJ4 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L11C9JVI0 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L18D6R9N7 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L22D6RA61 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L17D6RBQ6 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L19D6RCP7 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L20D6RJB6 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L24Q0WX57 530 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 ERCC6LQ2NKX8 1250 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 KRT79Q5XKE5 535 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 CNNM4Q6P4Q7 775 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 USP17L6PQ6QN14 398 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 LZTFL1Q9NQ48 299 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 BICDL2A1A5D9 508 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 KRT9P35527 623 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 ICA1Q05084 483 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 CDC37Q16543 378 aaPredicted RBP28.8■■■□□ 2.2
COL13A1-213ENST00000520267 KCNK18Q7Z418 384 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 RAD54LQ92698 747 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 KIFC2Q96AC6 838 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 IRX2Q9BZI1 471 aaPredicted RBP28.8■■■□□ 2.2
COL13A1-213ENST00000520267 SLC39A2Q9NP94 309 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 PCDHA1Q9Y5I3 950 aa28.8■■■□□ 2.2
COL13A1-213ENST00000520267 PES1O00541 588 aaKnown RBP28.79■■■□□ 2.2
COL13A1-213ENST00000520267 ECM1Q16610 540 aa28.79■■■□□ 2.2
COL13A1-213ENST00000520267 TMEM179Q6ZVK1 233 aa28.79■■■□□ 2.2
COL13A1-213ENST00000520267 DYMQ7RTS9 669 aa28.79■■■□□ 2.2
COL13A1-213ENST00000520267 TMTC1Q8IUR5 882 aa28.79■■■□□ 2.2
COL13A1-213ENST00000520267 TMEM119Q4V9L6 283 aa28.78■■■□□ 2.2
COL13A1-213ENST00000520267 COBLL1Q53SF7 1204 aa28.78■■■□□ 2.2
COL13A1-213ENST00000520267 GTPBP4Q9BZE4 634 aaKnown RBP28.78■■■□□ 2.2
COL13A1-213ENST00000520267 A0A1W2PQC6 194 aa28.78■■■□□ 2.2
COL13A1-213ENST00000520267 PPP1R2P41236 205 aa28.78■■■□□ 2.2
COL13A1-213ENST00000520267 UNC13DQ70J99 1090 aa28.78■■■□□ 2.2
COL13A1-213ENST00000520267 TUBGCP2Q9BSJ2 902 aa28.78■■■□□ 2.2
COL13A1-213ENST00000520267 JAG1P78504 1218 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 ABCB5Q2M3G0 1257 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 ZNF397Q8NF99 534 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-213ENST00000520267 SEMA6BQ9H3T3 888 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 TTC26A0AVF1 554 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 YDJCA8MPS7 323 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 B4DLN1 442 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 F5H6K3 240 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 GCFC2P16383 781 aaKnown RBP28.77■■■□□ 2.2
COL13A1-213ENST00000520267 KLRC3Q07444 240 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 CYP26C1Q6V0L0 522 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 ACRBPQ8NEB7 543 aa28.77■■■□□ 2.2
COL13A1-213ENST00000520267 PRMT6Q96LA8 375 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-213ENST00000520267 CNOT6LQ96LI5 555 aaKnown RBP28.77■■■□□ 2.2
COL13A1-213ENST00000520267 PVALEFA0A1B0GWK0 134 aa28.76■■■□□ 2.19
COL13A1-213ENST00000520267 SNAP25P60880 206 aa28.76■■■□□ 2.19
COL13A1-213ENST00000520267 CARD6Q9BX69 1037 aa28.76■■■□□ 2.19
COL13A1-213ENST00000520267 MARCH6O60337 910 aa28.76■■■□□ 2.19
COL13A1-213ENST00000520267 DNM2P50570 870 aa28.76■■■□□ 2.19
COL13A1-213ENST00000520267 MAP3K9P80192 1104 aa28.76■■■□□ 2.19
COL13A1-213ENST00000520267 UIMC1Q96RL1 719 aa28.76■■■□□ 2.19
COL13A1-213ENST00000520267 FBXO38Q6PIJ6 1188 aa28.75■■■□□ 2.19
COL13A1-213ENST00000520267 PCDHA12Q9UN75 941 aa28.75■■■□□ 2.19
COL13A1-213ENST00000520267 RGPD3A6NKT7 1758 aaPredicted RBP28.75■■■□□ 2.19
COL13A1-213ENST00000520267 RGPD4Q7Z3J3 1758 aa28.75■■■□□ 2.19
COL13A1-213ENST00000520267 RXRBP28702 533 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 SLC15A2Q16348 729 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 ANO3Q9BYT9 981 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 GLT8D2Q9H1C3 349 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 ATRNL1Q5VV63 1379 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 ENTPD3O75355 529 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 RRP1BQ14684 758 aaKnown RBP28.74■■■□□ 2.19
COL13A1-213ENST00000520267 CENPPQ6IPU0 288 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 DDX12PQ92771 950 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 CHP1Q99653 195 aa28.74■■■□□ 2.19
COL13A1-213ENST00000520267 SPDYE4A6NLX3 237 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 NKRFO15226 690 aaKnown RBP eCLIP28.73■■■□□ 2.19
COL13A1-213ENST00000520267 PPIP5K2O43314 1243 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 NDUFB10O96000 172 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 FAM114A1Q8IWE2 563 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 GMCL1P1Q8NEA9 526 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 MNS1Q8NEH6 495 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 MEIS2O14770 477 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 GH2P01242 217 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 NAP1L4Q99733 375 aaKnown RBP28.73■■■□□ 2.19
COL13A1-213ENST00000520267 MRFAP1Q9Y605 127 aa28.73■■■□□ 2.19
COL13A1-213ENST00000520267 C21orf2O43822 256 aa28.72■■■□□ 2.19
COL13A1-213ENST00000520267 IDEP14735 1019 aa28.72■■■□□ 2.19
COL13A1-213ENST00000520267 MTIF2P46199 727 aaKnown RBP28.72■■■□□ 2.19
COL13A1-213ENST00000520267 P2RX7Q99572 595 aaKnown RBP28.72■■■□□ 2.19
COL13A1-213ENST00000520267 CAPN11Q9UMQ6 739 aa28.72■■■□□ 2.19
COL13A1-213ENST00000520267 LUC7L2Q9Y383 392 aaKnown RBP28.72■■■□□ 2.19
COL13A1-213ENST00000520267 TADA3O75528 432 aa28.72■■■□□ 2.19
COL13A1-213ENST00000520267 MIIPQ5JXC2 388 aa28.72■■■□□ 2.19
COL13A1-213ENST00000520267 OR8K1Q8NGG5 319 aa28.72■■■□□ 2.19
COL13A1-213ENST00000520267 GMCL1Q96IK5 515 aa28.72■■■□□ 2.19
COL13A1-213ENST00000520267 RASSF10A6NK89 507 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 KLK7P49862 253 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 USP11P51784 963 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 CBX1P83916 185 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 EZH2Q15910 746 aaKnown RBP28.71■■■□□ 2.19
COL13A1-213ENST00000520267 GLIPR1L2Q4G1C9 344 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 RBM26Q5T8P6 1007 aaKnown RBP28.71■■■□□ 2.19
COL13A1-213ENST00000520267 ABL1P00519 1130 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms