RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 MRPL11Q9Y3B7 192 aaKnown RBP16.42■□□□□ 0.22
CLN8-204ENST00000519254 MYH7BA7E2Y1 1941 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 MYPNQ86TC9 1320 aa16.42■□□□□ 0.22
CLN8-204ENST00000519254 A0A087X0B3 334 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 OPLAHO14841 1288 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 PEX10O60683 326 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 CFBP00751 764 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 HOXA13P31271 388 aaPredicted RBP16.41■□□□□ 0.22
CLN8-204ENST00000519254 PNOCQ13519 176 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 TMEM132BQ14DG7 1078 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 NONOQ15233 471 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLN8-204ENST00000519254 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
CLN8-204ENST00000519254 BRI3BPQ8WY22 251 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
CLN8-204ENST00000519254 SERTAD1Q9UHV2 236 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 ADAMTS5Q9UNA0 930 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 TLL2Q9Y6L7 1015 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 TMEM88BA6NKF7 163 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 FOXN1O15353 648 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 ACTN4O43707 911 aaKnown RBP16.41■□□□□ 0.22
CLN8-204ENST00000519254 ADCY5O95622 1261 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 OSBPP22059 807 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 GRM1Q13255 1194 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
CLN8-204ENST00000519254 PDILTQ8N807 584 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 REPS2Q8NFH8 660 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 PAGR1Q9BTK6 254 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 GLT8D2Q9H1C3 349 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 TMEM60Q9H2L4 133 aa16.41■□□□□ 0.22
CLN8-204ENST00000519254 BTBD19C9JJ37 291 aa16.4■□□□□ 0.22
CLN8-204ENST00000519254 BIN1O00499 593 aa16.4■□□□□ 0.22
CLN8-204ENST00000519254 NLRP12P59046 1061 aa16.4■□□□□ 0.22
CLN8-204ENST00000519254 HERVK_113P62684 666 aa16.4■□□□□ 0.22
CLN8-204ENST00000519254 DPCR1Q3MIW9 517 aa16.4■□□□□ 0.22
CLN8-204ENST00000519254 TBC1D5Q92609 795 aa16.4■□□□□ 0.22
CLN8-204ENST00000519254 TRIM44Q96DX7 344 aaPredicted RBP16.4■□□□□ 0.22
CLN8-204ENST00000519254 ZNF214Q9UL59 606 aaPredicted RBP16.4■□□□□ 0.22
CLN8-204ENST00000519254 PDHXO00330 501 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 NFIBO00712 420 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 MEIS2O14770 477 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 CYP2C8P10632 490 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 CLK2P49760 499 aaKnown RBP16.39■□□□□ 0.21
CLN8-204ENST00000519254 OAZ1P54368 228 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 MUM1L1Q5H9M0 696 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 DHX40Q8IX18 779 aaKnown RBP16.39■□□□□ 0.21
CLN8-204ENST00000519254 CEP57L1Q8IYX8 460 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 TBCKQ8TEA7 893 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 TEX13BQ9BXU2 312 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
CLN8-204ENST00000519254 FSTL1Q12841 308 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 POTEEQ6S8J3 1075 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 RNF146Q9NTX7 359 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 PNMA3Q9UL41 463 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 PNMA2Q9UL42 364 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 GCOM1H8Y6P7 765 aaPredicted RBP16.38■□□□□ 0.21
CLN8-204ENST00000519254 EDIL3O43854 480 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 SLC10A3P09131 477 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 POLR2MP0CAP2 368 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 LONP1P36776 959 aaKnown RBP16.38■□□□□ 0.21
CLN8-204ENST00000519254 STAT3P40763 770 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 POSTNQ15063 836 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 ZRSR1Q15695 479 aaKnown RBP16.38■□□□□ 0.21
CLN8-204ENST00000519254 LETM2Q2VYF4 491 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 FAM43AQ8N2R8 423 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 MB21D1Q8N884 522 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 SMCR8Q8TEV9 937 aaPredicted RBP16.38■□□□□ 0.21
CLN8-204ENST00000519254 CLEC4DQ8WXI8 215 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 DHX58Q96C10 678 aa16.38■□□□□ 0.21
CLN8-204ENST00000519254 LAD1O00515 517 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 SLFN14P0C7P3 912 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 HS1BP3Q53T59 392 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 KANK3Q6NY19 840 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 NSMFQ6X4W1 530 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 ANKRD23Q86SG2 305 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 GRAMD1CQ8IYS0 662 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 PTPN18Q99952 460 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 BPIFA3Q9BQP9 254 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 ANO3Q9BYT9 981 aa16.37■□□□□ 0.21
CLN8-204ENST00000519254 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
CLN8-204ENST00000519254 HOOK1Q9UJC3 728 aaKnown RBP16.37■□□□□ 0.21
CLN8-204ENST00000519254 PIK3CDO00329 1044 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 ATP2A1O14983 1001 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 CCNT1O60563 726 aaKnown RBP16.36■□□□□ 0.21
CLN8-204ENST00000519254 PRPHP41219 470 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 SARSP49591 514 aaKnown RBP16.36■□□□□ 0.21
CLN8-204ENST00000519254 AP3B2Q13367 1082 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 E2F4Q16254 413 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 NT5DC1Q5TFE4 455 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 ISM2Q6H9L7 571 aa16.36■□□□□ 0.21
CLN8-204ENST00000519254 DTHD1Q6ZMT9 781 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms