RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 RIOX1Q9H6W3 641 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 MRPL44Q9H9J2 332 aaKnown RBP9.02□□□□□ -0.97
DDR1-273ENST00000513514 BMP2KQ9NSY1 1161 aaPredicted RBP9.02□□□□□ -0.97
DDR1-273ENST00000513514 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 PODXL2Q9NZ53 605 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.02□□□□□ -0.97
DDR1-273ENST00000513514 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.02□□□□□ -0.97
DDR1-273ENST00000513514 PLAGL2Q9UPG8 496 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 JRKLQ9Y4A0 524 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 DAAM1Q9Y4D1 1078 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 ANKRD31Q8N7Z5 1873 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 MYH13Q9UKX3 1938 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 SSU72P8A0A1W2PR75 194 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 CCDC85CA6NKD9 419 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 UBE2Q2LH0YL09 131 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 C21orf2O43822 256 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 TCP1P17987 556 aaKnown RBP9.01□□□□□ -0.97
DDR1-273ENST00000513514 TRIM21P19474 475 aaKnown RBP9.01□□□□□ -0.97
DDR1-273ENST00000513514 ARHGAP25P42331 645 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 AARSP49588 968 aaKnown RBP eCLIP9.01□□□□□ -0.97
DDR1-273ENST00000513514 TBC1D8BQ0IIM8 1120 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 KIF5AQ12840 1032 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 IL17AQ16552 155 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 NAALADL2Q58DX5 795 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 C10orf76Q5T2E6 689 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 GPATCH4Q5T3I0 446 aaKnown RBP9.01□□□□□ -0.97
DDR1-273ENST00000513514 PPP4R3CPQ6ZMV5 832 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 UNC13DQ70J99 1090 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 IRF2BP1Q8IU81 584 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 EIF1ADQ8N9N8 165 aaKnown RBP9.01□□□□□ -0.97
DDR1-273ENST00000513514 GOLGA5Q8TBA6 731 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 CELF1Q92879 486 aaKnown RBP9.01□□□□□ -0.97
DDR1-273ENST00000513514 CEP63Q96MT8 703 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 PURBQ96QR8 312 aaKnown RBP9.01□□□□□ -0.97
DDR1-273ENST00000513514 TSG101Q99816 390 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 TRIM9Q9C026 710 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 TTYH3Q9C0H2 523 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 LZTFL1Q9NQ48 299 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 IL17RBQ9NRM6 502 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 KDM3AQ9Y4C1 1321 aa9.01□□□□□ -0.97
DDR1-273ENST00000513514 TTC26A0AVF1 554 aa9□□□□□ -0.97
DDR1-273ENST00000513514 KLRF2D3W0D1 207 aa9□□□□□ -0.97
DDR1-273ENST00000513514 SNAP23O00161 211 aa9□□□□□ -0.97
DDR1-273ENST00000513514 CES2O00748 559 aa9□□□□□ -0.97
DDR1-273ENST00000513514 FANCGO15287 622 aa9□□□□□ -0.97
DDR1-273ENST00000513514 TACC1O75410 805 aa9□□□□□ -0.97
DDR1-273ENST00000513514 PRDM1O75626 825 aa9□□□□□ -0.97
DDR1-273ENST00000513514 SERPINB2P05120 415 aa9□□□□□ -0.97
DDR1-273ENST00000513514 VAV2P52735 878 aa9□□□□□ -0.97
DDR1-273ENST00000513514 USP14P54578 494 aa9□□□□□ -0.97
DDR1-273ENST00000513514 STX17P56962 302 aa9□□□□□ -0.97
DDR1-273ENST00000513514 ERVK-24P63145 666 aa9□□□□□ -0.97
DDR1-273ENST00000513514 MLLT1Q03111 559 aaPredicted RBP9□□□□□ -0.97
DDR1-273ENST00000513514 SLC20A2Q08357 652 aa9□□□□□ -0.97
DDR1-273ENST00000513514 KARSQ15046 597 aaKnown RBP9□□□□□ -0.97
DDR1-273ENST00000513514 MAN2A1Q16706 1144 aa9□□□□□ -0.97
DDR1-273ENST00000513514 HYIQ5T013 277 aa9□□□□□ -0.97
DDR1-273ENST00000513514 CCDC122Q5T0U0 273 aa9□□□□□ -0.97
DDR1-273ENST00000513514 TBC1D9BQ66K14 1250 aa9□□□□□ -0.97
DDR1-273ENST00000513514 MOXD1Q6UVY6 613 aa9□□□□□ -0.97
DDR1-273ENST00000513514 KIAA1328Q86T90 577 aa9□□□□□ -0.97
DDR1-273ENST00000513514 REXO1Q8N1G1 1221 aaKnown RBP9□□□□□ -0.97
DDR1-273ENST00000513514 SLC35F6Q8N357 371 aa9□□□□□ -0.97
DDR1-273ENST00000513514 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
DDR1-273ENST00000513514 ALS2CR12Q96Q35 445 aa9□□□□□ -0.97
DDR1-273ENST00000513514 TMEM47Q9BQJ4 181 aa9□□□□□ -0.97
DDR1-273ENST00000513514 MRIQ9BWK5 157 aa9□□□□□ -0.97
DDR1-273ENST00000513514 FAM107BQ9H098 131 aa9□□□□□ -0.97
DDR1-273ENST00000513514 VPS16Q9H269 839 aa9□□□□□ -0.97
DDR1-273ENST00000513514 ANKZF1Q9H8Y5 726 aa9□□□□□ -0.97
DDR1-273ENST00000513514 PCDH10Q9P2E7 1040 aa9□□□□□ -0.97
DDR1-273ENST00000513514 FAM184BQ9ULE4 1060 aa9□□□□□ -0.97
DDR1-273ENST00000513514 SYNPO2Q9UMS6 1093 aa9□□□□□ -0.97
DDR1-273ENST00000513514 THSD7BQ9C0I4 1608 aa9□□□□□ -0.97
DDR1-273ENST00000513514 GAKO14976 1311 aa9□□□□□ -0.97
DDR1-273ENST00000513514 FAM205AQ6ZU69 1335 aa9□□□□□ -0.97
DDR1-273ENST00000513514 FER1L6Q2WGJ9 1857 aa9□□□□□ -0.97
DDR1-273ENST00000513514 LTBP1Q14766 1721 aa9□□□□□ -0.97
DDR1-273ENST00000513514 ADAMTSL1Q8N6G6 1762 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 FAM205CA6NFA0 338 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 SMCO2A6NFE2 343 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 PJA2O43164 708 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 SNHG28P0DPA3 235 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 RASA1P20936 1047 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 TNFRSF8P28908 595 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 OAS2P29728 719 aaKnown RBP8.99□□□□□ -0.97
DDR1-273ENST00000513514 PRDX5P30044 214 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 CCT6AP40227 531 aaKnown RBP8.99□□□□□ -0.97
DDR1-273ENST00000513514 MRPL12P52815 198 aaKnown RBP8.99□□□□□ -0.97
DDR1-273ENST00000513514 NAPAP54920 295 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 MARSP56192 900 aaKnown RBP8.99□□□□□ -0.97
DDR1-273ENST00000513514 APBA1Q02410 837 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 PDE4DQ08499 809 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 MAPK8IP2Q13387 824 aaPredicted RBP8.99□□□□□ -0.97
DDR1-273ENST00000513514 NNTQ13423 1086 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 VWA3BQ502W6 1294 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 EAPPQ56P03 285 aaPredicted RBP8.99□□□□□ -0.97
DDR1-273ENST00000513514 FAM47AQ5JRC9 791 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 KRT79Q5XKE5 535 aa8.99□□□□□ -0.97
DDR1-273ENST00000513514 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms