RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 AURKAO14965 403 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 TBX1O43435 398 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 ADCY3O60266 1144 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 IGSF3O75054 1194 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 SCG5P05408 212 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 IFNGR1P15260 489 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 SSPNQ14714 243 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 CCDC144BQ3MJ40 725 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 HSF5Q4G112 596 aaPredicted RBP5.67□□□□□ -1.5
NUP54-212ENST00000513248 GALNT18Q6P9A2 607 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 SPATC1Q76KD6 591 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 DPH6Q7L8W6 267 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 SLCO6A1Q86UG4 719 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 COPS5Q92905 334 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 PLCD4Q9BRC7 762 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 LGR4Q9BXB1 951 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 PPP1R1BQ9UD71 204 aaPredicted RBP5.67□□□□□ -1.5
NUP54-212ENST00000513248 AKT3Q9Y243 479 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 IRAK3Q9Y616 596 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 TAF6LQ9Y6J9 622 aa5.67□□□□□ -1.5
NUP54-212ENST00000513248 PRG4Q92954 1404 aaPredicted RBP5.66□□□□□ -1.5
NUP54-212ENST00000513248 A0A1W2PQ45 241 aaPredicted RBP5.66□□□□□ -1.5
NUP54-212ENST00000513248 A0A1W2PQY0 241 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 WTIPA6NIX2 430 aaPredicted RBP5.66□□□□□ -1.5
NUP54-212ENST00000513248 FGF10O15520 208 aaPredicted RBP5.66□□□□□ -1.5
NUP54-212ENST00000513248 SASH1O94885 1247 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 TESK1Q15569 626 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 RCSD1Q6JBY9 416 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 CYP2R1Q6VVX0 501 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 SIRT2Q8IXJ6 389 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 PMFBP1Q8TBY8 1022 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 DACT3Q96B18 629 aaPredicted RBP5.66□□□□□ -1.5
NUP54-212ENST00000513248 C1orf159Q96HA4 380 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 SGPP1Q9BX95 441 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 XYLT2Q9H1B5 865 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 PIF1Q9H611 641 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 CRTAC1Q9NQ79 661 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 MBD1Q9UIS9 605 aaPredicted RBP5.66□□□□□ -1.5
NUP54-212ENST00000513248 CDK11AQ9UQ88 783 aaPredicted RBP5.66□□□□□ -1.5
NUP54-212ENST00000513248 SUGT1Q9Y2Z0 365 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 CEP170Q5SW79 1584 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 CARMIL1Q5VZK9 1371 aa5.66□□□□□ -1.5
NUP54-212ENST00000513248 NUP160Q12769 1436 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 ARNTLO00327 626 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 U2SURPO15042 1029 aaKnown RBP5.65□□□□□ -1.5
NUP54-212ENST00000513248 VAMP4O75379 141 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 AMPD2Q01433 879 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 GTF2IRD2BQ6EKJ0 949 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 GTF2IRD2Q86UP8 949 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 KREMEN2Q8NCW0 462 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 JMJD8Q96S16 334 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 NKX2-4Q9H2Z4 354 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 CYP26B1Q9NR63 512 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 ARHGEF4Q9NR80 690 aa5.65□□□□□ -1.5
NUP54-212ENST00000513248 STXBP3O00186 592 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 N4BP3O15049 544 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 DIAPH1O60610 1272 aaKnown RBP5.64□□□□□ -1.51
NUP54-212ENST00000513248 PNLIPP16233 465 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 PI3P19957 117 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 GRIA2P42262 883 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 PPP2R2AP63151 447 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 SRSF3P84103 164 aaKnown RBP5.64□□□□□ -1.51
NUP54-212ENST00000513248 KIR3DS1Q14943 382 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 DPY19L1Q2PZI1 675 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 SV2CQ496J9 727 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 ADGRF1Q5T601 910 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 ERICH6BQ5W0A0 696 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 HLA-DQA1Q5Y7H0 255 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 OLFML2BQ68BL8 750 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 POMZP3Q6PJE2 187 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 FAM9AQ8IZU1 332 aaPredicted RBP5.64□□□□□ -1.51
NUP54-212ENST00000513248 LILRB2Q8N423 598 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 NUP43Q8NFH3 380 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 PTCHD1Q96NR3 888 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 SPATA9Q9BWV2 254 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 IMPACTQ9P2X3 320 aa5.64□□□□□ -1.51
NUP54-212ENST00000513248 KCNH1O95259 989 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 PRKCAP17252 672 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 HOXC12P31275 282 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
NUP54-212ENST00000513248 GFRA1P56159 465 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 YBX1P67809 324 aaKnown RBP5.63□□□□□ -1.51
NUP54-212ENST00000513248 LAPTM5Q13571 262 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 LONRF2Q1L5Z9 754 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 EEF1DP3Q658K8 133 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 DENND5AQ6IQ26 1287 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 JAMLQ86YT9 394 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 CRACR2BQ8N4Y2 399 aaPredicted RBP5.63□□□□□ -1.51
NUP54-212ENST00000513248 NPLOC4Q8TAT6 608 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 BTN2A2Q8WVV5 523 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 BORCS6Q96GS4 357 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 SIRT5Q9NXA8 310 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 ACSL6Q9UKU0 697 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 BACE2Q9Y5Z0 518 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 CUL7Q14999 1698 aa5.63□□□□□ -1.51
NUP54-212ENST00000513248 IQCA1LA6NCM1 817 aa5.62□□□□□ -1.51
NUP54-212ENST00000513248 NOP56O00567 594 aaKnown RBP5.62□□□□□ -1.51
NUP54-212ENST00000513248 ABLIM1O14639 778 aa5.62□□□□□ -1.51
NUP54-212ENST00000513248 IRS4O14654 1257 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms