RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 SHROOM2Q13796 1616 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 FSD2A1L4K1 749 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 B4DLN1 442 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 EIF3FO00303 357 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 GAS7O60861 476 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 LILRA1O75019 489 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 XYLBO75191 536 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 TMEM127O75204 238 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 CYP11A1P05108 521 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 C6orf222P0C671 652 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 ABCB4P21439 1286 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 FSHRP23945 695 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 AKAP5P24588 427 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 GRK2P25098 689 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 GTF2E1P29083 439 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 ATP6V1E1P36543 226 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 PSEN2P49810 448 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ZNF143P52747 638 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 SH3BP2P78314 561 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 RPL6Q02878 288 aaKnown RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 ZNF252P-AS1Q0IIN9 211 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 MTA1Q13330 715 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 SEMA5AQ13591 1074 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 TRIM29Q14134 588 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ACAP2Q15057 778 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ANO4Q32M45 955 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ZC3H12AQ5D1E8 599 aaKnown RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 DGKKQ5KSL6 1271 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 FKBP15Q5T1M5 1219 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 CFAP58Q5T655 872 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 DSTYKQ6XUX3 929 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 DPP9Q86TI2 863 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 PTRH1Q86Y79 214 aaKnown RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 KIF18BQ86Y91 864 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 CCNJLQ8IV13 435 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 NXPE1Q8N323 547 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 TEX9Q8N6V9 391 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 SLC30A5Q8TAD4 765 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 GRIN3AQ8TCU5 1115 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ZFPM2Q8WW38 1151 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 SMARCC1Q92922 1105 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 CENPTQ96BT3 561 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 HSH2DQ96JZ2 352 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ZSCAN31Q96LW9 406 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 MAGEB10Q96LZ2 347 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 MAP3K14Q99558 947 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 VTA1Q9NP79 307 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 SCUBE2Q9NQ36 999 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ARGLU1Q9NWB6 273 aaPredicted RBP3.84□□□□□ -1.79
PVT1-202ENST00000512617 C14orf119Q9NWQ9 140 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 GPRC5BQ9NZH0 403 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 CCDC39Q9UFE4 941 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 SALL4Q9UJQ4 1053 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 RABL2BQ9UNT1 228 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 CYP8B1Q9UNU6 501 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 POLHQ9Y253 713 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 HRH3Q9Y5N1 445 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 FHAD1B1AJZ9 1412 aa3.84□□□□□ -1.79
PVT1-202ENST00000512617 ERCC6L2Q5T890 1561 aa3.84□□□□□ -1.8
PVT1-202ENST00000512617 A0A087WV62 115 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 TCRBV16S1A1N1A0A5B0 115 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 KLHL33A6NCF5 533 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 B4E171 279 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 FAM227AF5H4B4 570 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TBC1D8O95759 1140 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TBX18O95935 607 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 CYP2E1P05181 493 aaPredicted RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 DHRS4L1P0CG22 281 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ACRP10323 421 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 MTHFD1P11586 935 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 HOXB3P14651 431 aaPredicted RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 MX2P20592 715 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ITPKAP23677 461 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 STAT1P42224 750 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 LSSP48449 732 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ATXN1P54253 815 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 BPIFB3P59826 476 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 OCRLQ01968 901 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 MLLT1Q03111 559 aaPredicted RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 PPP2R3AQ06190 1150 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 PPP2R5DQ14738 602 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ARID5BQ14865 1188 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 LRRC14Q15048 493 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 PTPN14Q15678 1187 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 CLUL1Q15846 466 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 HECTD3Q5T447 861 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 RASIP1Q5U651 963 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 INTS3Q68E01 1043 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 OVOS1Q6IE37 1185 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TMEM214Q6NUQ4 689 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 LLGL2Q6P1M3 1020 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 DARS2Q6PI48 645 aaKnown RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 CCDC73Q6ZRK6 1079 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 NYAP1Q6ZVC0 841 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 ENOSF1Q7L5Y1 443 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TTC30AQ86WT1 665 aa3.83□□□□□ -1.8
PVT1-202ENST00000512617 TMEM102Q8N9M5 508 aaPredicted RBP3.83□□□□□ -1.8
PVT1-202ENST00000512617 PCYOX1LQ8NBM8 494 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms