RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 ARMCX2Q7L311 632 aa14.02□□□□□ -0.16
LIN54-210ENST00000510877 TLK2Q86UE8 772 aa14.02□□□□□ -0.16
LIN54-210ENST00000510877 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.16
LIN54-210ENST00000510877 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.16
LIN54-210ENST00000510877 SHMT1P34896 483 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 TFDP1Q14186 410 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 TPH2Q8IWU9 490 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 PPP1R16BQ96T49 567 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 MTG1Q9BT17 334 aaPredicted RBP14.02□□□□□ -0.17
LIN54-210ENST00000510877 PSAPP07602 524 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 MCM7P33993 719 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 STIM1Q13586 685 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 ALX1Q15699 326 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 FBXO16Q8IX29 292 aaPredicted RBP14.02□□□□□ -0.17
LIN54-210ENST00000510877 DEPTORQ8TB45 409 aa14.02□□□□□ -0.17
LIN54-210ENST00000510877 DDX20Q9UHI6 824 aaKnown RBP14.02□□□□□ -0.17
LIN54-210ENST00000510877 NKRFO15226 690 aaKnown RBP eCLIP14.01□□□□□ -0.171e-13■□□□□ 11
LIN54-210ENST00000510877 FAM13AO94988 1023 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 TXKP42681 527 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 FSCN1Q16658 493 aaKnown RBP14.01□□□□□ -0.17
LIN54-210ENST00000510877 PIK3AP1Q6ZUJ8 805 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 APOL6Q9BWW8 343 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 ACBD3Q9H3P7 528 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 UQCRHLA0A096LP55 91 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 BMP15O95972 392 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 UQCRHP07919 91 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 LRCH2Q5VUJ6 765 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 IER5Q5VY09 327 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 ZNF589Q86UQ0 364 aaPredicted RBP14.01□□□□□ -0.17
LIN54-210ENST00000510877 KCNG1Q9UIX4 513 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 KIF20AO95235 890 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 SCG2P13521 617 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 SEPT8Q92599 483 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 FAM167AQ96KS9 214 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 ZIC5Q96T25 663 aa14.01□□□□□ -0.17
LIN54-210ENST00000510877 THPOP40225 353 aa14□□□□□ -0.17
LIN54-210ENST00000510877 USP8P40818 1118 aa14□□□□□ -0.17
LIN54-210ENST00000510877 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
LIN54-210ENST00000510877 NUCB2P80303 420 aa14□□□□□ -0.17
LIN54-210ENST00000510877 AMPD3Q01432 767 aa14□□□□□ -0.17
LIN54-210ENST00000510877 FERMT3Q86UX7 667 aa14□□□□□ -0.17
LIN54-210ENST00000510877 RIOX2Q8IUF8 465 aa14□□□□□ -0.17
LIN54-210ENST00000510877 ADGRF4Q8IZF3 695 aa14□□□□□ -0.17
LIN54-210ENST00000510877 FAM161BQ96MY7 647 aa14□□□□□ -0.17
LIN54-210ENST00000510877 IRS2Q9Y4H2 1338 aa14□□□□□ -0.17
LIN54-210ENST00000510877 PPFIA1Q13136 1202 aa14□□□□□ -0.17
LIN54-210ENST00000510877 CATSPER4Q7RTX7 472 aa14□□□□□ -0.17
LIN54-210ENST00000510877 PHKBQ93100 1093 aa14□□□□□ -0.17
LIN54-210ENST00000510877 RIOK1Q9BRS2 568 aaKnown RBP14□□□□□ -0.17
LIN54-210ENST00000510877 GBP3Q9H0R5 595 aa14□□□□□ -0.17
LIN54-210ENST00000510877 DEF6Q9H4E7 631 aa14□□□□□ -0.17
LIN54-210ENST00000510877 MTUS1Q9ULD2 1270 aa14□□□□□ -0.17
LIN54-210ENST00000510877 hCG_1984214I3L0E3 225 aa14□□□□□ -0.17
LIN54-210ENST00000510877 INO80B-WBP1J3KQ70 363 aa14□□□□□ -0.17
LIN54-210ENST00000510877 KIF4AO95239 1232 aa14□□□□□ -0.17
LIN54-210ENST00000510877 PPIGQ13427 754 aaKnown RBP eCLIP14□□□□□ -0.17
LIN54-210ENST00000510877 ZNF713Q8N859 430 aaPredicted RBP14□□□□□ -0.17
LIN54-210ENST00000510877 NECAB1Q8N987 351 aa14□□□□□ -0.17
LIN54-210ENST00000510877 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
LIN54-210ENST00000510877 AAASQ9NRG9 546 aa14□□□□□ -0.17
LIN54-210ENST00000510877 PHACTR2O75167 634 aa14□□□□□ -0.17
LIN54-210ENST00000510877 ICAM1P05362 532 aa14□□□□□ -0.17
LIN54-210ENST00000510877 SSTR3P32745 418 aaPredicted RBP14□□□□□ -0.17
LIN54-210ENST00000510877 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
LIN54-210ENST00000510877 ZSCAN30Q86W11 494 aa14□□□□□ -0.17
LIN54-210ENST00000510877 PIDD1Q9HB75 910 aa14□□□□□ -0.17
LIN54-210ENST00000510877 VTA1Q9NP79 307 aa14□□□□□ -0.17
LIN54-210ENST00000510877 INCENPQ9NQS7 918 aa14□□□□□ -0.17
LIN54-210ENST00000510877 VPS54Q9P1Q0 977 aa14□□□□□ -0.17
LIN54-210ENST00000510877 SLC45A1Q9Y2W3 748 aa14□□□□□ -0.17
LIN54-210ENST00000510877 NUB1Q9Y5A7 615 aa14□□□□□ -0.17
LIN54-210ENST00000510877 SLC4A7Q9Y6M7 1214 aa14□□□□□ -0.17
LIN54-210ENST00000510877 SPDYE16A6NNV3 312 aaPredicted RBP13.99□□□□□ -0.17
LIN54-210ENST00000510877 IQSEC1Q6DN90 963 aa13.99□□□□□ -0.17
LIN54-210ENST00000510877 CXCL17Q6UXB2 119 aa13.99□□□□□ -0.17
LIN54-210ENST00000510877 CALCOCO1Q9P1Z2 691 aa13.99□□□□□ -0.17
LIN54-210ENST00000510877 RDXP35241 583 aaKnown RBP13.99□□□□□ -0.17
LIN54-210ENST00000510877 YARSP54577 528 aaKnown RBP13.99□□□□□ -0.17
LIN54-210ENST00000510877 TWF2Q6IBS0 349 aaKnown RBP13.99□□□□□ -0.17
LIN54-210ENST00000510877 INPP5FQ9Y2H2 1132 aa13.99□□□□□ -0.17
LIN54-210ENST00000510877 STAG3L1P0CL83 205 aa13.99□□□□□ -0.17
LIN54-210ENST00000510877 CCL23P55773 120 aa13.99□□□□□ -0.17
LIN54-210ENST00000510877 GRPEL1Q9HAV7 217 aa13.99□□□□□ -0.17
LIN54-210ENST00000510877 EIF3JO75822 258 aaKnown RBP13.98□□□□□ -0.17
LIN54-210ENST00000510877 MARCKSP29966 332 aaPredicted RBP13.98□□□□□ -0.17
LIN54-210ENST00000510877 OAZ1P54368 228 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 ZNF697Q5TEC3 545 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 USP37Q86T82 979 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 SIRT2Q8IXJ6 389 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 EMILIN3Q9NT22 766 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 SEPT4O43236 478 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 SMC1AQ14683 1233 aaKnown RBP13.98□□□□□ -0.17
LIN54-210ENST00000510877 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 DTHD1Q6ZMT9 781 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 USP26Q9BXU7 913 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 PORCNQ9H237 461 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 PARP2Q9UGN5 583 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 FAM50BQ9Y247 325 aa13.98□□□□□ -0.17
LIN54-210ENST00000510877 ELF1P32519 619 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms