RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 LONP1P36776 959 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 KLRC3Q07444 240 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 KARSQ15046 597 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 UBE2SQ16763 222 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 TOGARAM2Q6ZUX3 1019 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 NEK8Q86SG6 692 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 MED15Q96RN5 788 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 NDUFB10O96000 172 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 TXLNAP40222 546 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 NBPF9Q3BBW0 867 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 APTXQ7Z2E3 356 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 TRMT44Q8IYL2 757 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 LRRN4CLQ8ND94 238 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 AGBL3Q8NEM8 1001 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 FAM151AQ8WW52 585 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 WDR24Q96S15 920 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 MTRQ99707 1265 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 VPS33BQ9H267 617 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 LIMA1Q9UHB6 759 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
SH3RF1-203ENST00000508685 CCDC151A5D8V7 595 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 WNT10BO00744 389 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 GTPBP6O43824 516 aaPredicted RBP12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 MFAP3LO75121 409 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 EGFRP00533 1210 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 ECE1P42892 770 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 PLA2G4AP47712 749 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 SNAP25P60880 206 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 GOLGA8FQ08AF8 430 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 GOLGA8DPQ0D2H9 430 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 QRICH1Q2TAL8 776 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 CC2D1AQ6P1N0 951 aaPredicted RBP12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 PDXDC2PQ6P474 469 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 HNRNPLLQ8WVV9 542 aaKnown RBP12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
SH3RF1-203ENST00000508685 FANCGO15287 622 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 EDIL3O43854 480 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 MYL1P05976 194 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 TNNI2P48788 182 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 RBL2Q08999 1139 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 GPS2Q13227 327 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 HSP90AA4PQ58FG1 418 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 JDP2Q8WYK2 163 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 UBXN6Q9BZV1 441 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 BLZF1Q9H2G9 400 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 RIC8AQ9NPQ8 531 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 DISC1Q9NRI5 854 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 CALCOCO1Q9P1Z2 691 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 CDC23Q9UJX2 597 aa12.33□□□□□ -0.43
SH3RF1-203ENST00000508685 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 LAD1O00515 517 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 SLC37A4O43826 429 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 TDP2O95551 362 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 PPP1R18Q6NYC8 613 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 SMYD4Q8IYR2 804 aaPredicted RBP12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 PLIN2Q99541 437 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 MYOZ2Q9NPC6 264 aa12.33□□□□□ -0.44
SH3RF1-203ENST00000508685 ERLIN1O75477 346 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 CYP2C19P33261 490 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 PRPHP41219 470 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 STAT6P42226 847 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 RASSF7Q02833 373 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 IKQ13123 557 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 KIAA1755Q5JYT7 1200 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 RASSF8Q8NHQ8 419 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 ACER1Q8TDN7 264 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 LRRC15Q8TF66 581 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 CUL5Q93034 780 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 PSTPIP2Q9H939 334 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 PCDHA1Q9Y5I3 950 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
SH3RF1-203ENST00000508685 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms