RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 MCF2L2Q86YR7 1114 aa20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 PPP4R2Q9NY27 417 aa20.91■□□□□ 0.94
SH3TC1-208ENST00000504223 MROH7Q68CQ1 1323 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 DCDC2CA8MYV0 355 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 ARVCFO00192 962 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 LIFRP42702 1097 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 SLC43A3Q8NBI5 491 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 KCNB2Q92953 911 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 NEK1Q96PY6 1258 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 MPHOSPH6Q99547 160 aaKnown RBP20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 MAP3K14Q99558 947 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 TMEM39AQ9NV64 488 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 TBX21Q9UL17 535 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 PCDHA1Q9Y5I3 950 aa20.9■□□□□ 0.94
SH3TC1-208ENST00000504223 CABYRO75952 493 aa20.89■□□□□ 0.93
SH3TC1-208ENST00000504223 HSD17B4P51659 736 aa20.89■□□□□ 0.93
SH3TC1-208ENST00000504223 RNF20Q5VTR2 975 aa20.89■□□□□ 0.93
SH3TC1-208ENST00000504223 GPR153Q6NV75 609 aa20.89■□□□□ 0.93
SH3TC1-208ENST00000504223 FAM126BQ8IXS8 530 aa20.89■□□□□ 0.93
SH3TC1-208ENST00000504223 CMTR1Q8N1G2 835 aaKnown RBP20.89■□□□□ 0.93
SH3TC1-208ENST00000504223 GRIN2DO15399 1336 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 PNMA6FA0A0J9YX94 578 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 B4DLN1 442 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 ARIH2O95376 493 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 CFBP00751 764 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 RAG1P15918 1043 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 MRPL12P52815 198 aaKnown RBP20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 NFXL1Q6ZNB6 911 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 SGMS1Q86VZ5 419 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 SRBD1Q8N5C6 995 aaKnown RBP20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 NSUN6Q8TEA1 469 aaKnown RBP20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 SCFD2Q8WU76 684 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 VTI1AQ96AJ9 217 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 SPZ1Q9BXG8 430 aa20.88■□□□□ 0.93
SH3TC1-208ENST00000504223 CCDC69A6NI79 296 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 ZEB2O60315 1214 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 CPA1P15085 419 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 HOXA13P31271 388 aaPredicted RBP20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 PPP2R5BQ15173 497 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 SHHQ15465 462 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 C9orf50Q5SZB4 431 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 CTCFLQ8NI51 663 aaPredicted RBP20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 COPS5Q92905 334 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 RMDN3Q96TC7 470 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 BRPF3Q9ULD4 1205 aa20.87■□□□□ 0.93
SH3TC1-208ENST00000504223 NKRFO15226 690 aaKnown RBP eCLIP20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 CD4P01730 458 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 EIF2AK2P19525 551 aaKnown RBP20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 HSPA4P34932 840 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 EPHB4P54760 987 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 ITGA7Q13683 1181 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 ERICH6BQ5W0A0 696 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 DHX32Q7L7V1 743 aaKnown RBP20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 TMTC2Q8N394 836 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 IWS1Q96ST2 819 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 SNX14Q9Y5W7 946 aa20.86■□□□□ 0.93
SH3TC1-208ENST00000504223 TIMP1P01033 207 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 KIF5BP33176 963 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 CPT1AP50416 773 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 PURAQ00577 322 aaKnown RBP20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 CCDC62Q6P9F0 684 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 OR6J1Q8NGC5 347 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 IL31RAQ8NI17 732 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 PXMP2Q9NR77 195 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 MAP3K20Q9NYL2 800 aaKnown RBP20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 SLC12A7Q9Y666 1083 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 SCN10AQ9Y5Y9 1956 aa20.85■□□□□ 0.93
SH3TC1-208ENST00000504223 hCG_1642624A0A1W2PR95 340 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 TXNP10599 105 aaKnown RBP20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 SMARCA1P28370 1054 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 PSMC6P62333 389 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 FPGSQ05932 587 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 TTLL4Q14679 1199 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 ARHGEF16Q5VV41 709 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 APOA5Q6Q788 366 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 TMTC3Q6ZXV5 915 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 SEZ6LQ9BYH1 1024 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
SH3TC1-208ENST00000504223 MYH7BA7E2Y1 1941 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 A6NJR5 290 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 TLR3O15455 904 aaKnown RBP20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 CENPBP07199 599 aaPredicted RBP20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 NR3C2P08235 984 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 TRAF1Q13077 416 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 STXBP2Q15833 593 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 MFSD5Q6N075 450 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 SAMD3Q8N6K7 520 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 FANCBQ8NB91 859 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 PDCD2LQ9BRP1 358 aa20.83■□□□□ 0.93
SH3TC1-208ENST00000504223 RGS20O76081 388 aa20.82■□□□□ 0.92
SH3TC1-208ENST00000504223 KRT32Q14532 448 aa20.82■□□□□ 0.92
SH3TC1-208ENST00000504223 SEPT14Q6ZU15 432 aa20.82■□□□□ 0.92
SH3TC1-208ENST00000504223 CCDC82Q8N4S0 544 aa20.82■□□□□ 0.92
SH3TC1-208ENST00000504223 RRP36Q96EU6 259 aaKnown RBP20.82■□□□□ 0.92
SH3TC1-208ENST00000504223 JAKMIP1Q96N16 626 aaKnown RBP20.82■□□□□ 0.92
SH3TC1-208ENST00000504223 LZTS2Q9BRK4 669 aa20.82■□□□□ 0.92
SH3TC1-208ENST00000504223 CNTNAP5Q8WYK1 1306 aa20.81■□□□□ 0.92
SH3TC1-208ENST00000504223 GCOM1H8Y6P7 765 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms