RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 RAB27AP51159 221 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 TBX4P57082 545 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 NKPD1Q17RQ9 610 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 TMEM177Q53S58 311 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 FAM47CQ5HY64 1035 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 SYDE2Q5VT97 1194 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 FBXL6Q8N531 539 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 COG1Q8WTW3 980 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 RELTQ969Z4 430 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 PTCHD1Q96NR3 888 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 FOXP3Q9BZS1 431 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 AP5S1Q9NUS5 200 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 ZSWIM5Q9P217 1185 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 GABBR1Q9UBS5 961 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 SPEF1Q9Y4P9 236 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 WASH4PA8MWX3 477 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 WNT9AO14904 365 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 PRC1O43663 620 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 MYO1BO43795 1136 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 MAP4K4O95819 1239 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 LSSP48449 732 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 ST5P78524 1137 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 OCRLQ01968 901 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 INF2Q27J81 1249 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 IQSEC1Q6DN90 963 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 RNF111Q6ZNA4 994 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 OVCH1Q7RTY7 1134 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 THAP5Q7Z6K1 395 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 PASD1Q8IV76 773 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 CHST14Q8NCH0 376 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 FBXW5Q969U6 566 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 GPR101Q96P66 508 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 YIPF4Q9BSR8 244 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 CDADC1Q9BWV3 514 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 IPPKQ9H8X2 491 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 PCDHA2Q9Y5H9 948 aa7.08□□□□□ -1.28
HMGB1P3-201ENST00000502802 E2F8A0AVK6 867 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 CCDC66A2RUB6 948 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 FAM47E-STBD1D6RA91 191 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 GABRDO14764 452 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 AKAP10O43572 662 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 TBC1D8O95759 1140 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 F13BP05160 661 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 CHRNA4P43681 627 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 DNM2P50570 870 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 MECP2P51608 486 aaKnown RBP7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 FAPQ12884 760 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 LRRC41Q15345 812 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 GAB4Q2WGN9 574 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 ATP13A4Q4VNC1 1196 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 RNF43Q68DV7 783 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 C16orf59Q7L2K0 433 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 ZBTB46Q86UZ6 589 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 CPNE8Q86YQ8 564 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 SPACA3Q8IXA5 215 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 UBE2FQ969M7 185 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 TP53INP1Q96A56 240 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 CHMP4CQ96CF2 233 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 HSPA12BQ96MM6 686 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 AASDHPPTQ9NRN7 309 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 THG1LQ9NWX6 298 aaKnown RBP7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 ZIM2Q9NZV7 527 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 DUSP13Q9UII6 198 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 U3KQE9 123 aa7.07□□□□□ -1.28
HMGB1P3-201ENST00000502802 H3BS24 57 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 KIF3BO15066 747 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 FKTNO75072 461 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 ULK1O75385 1050 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 PRKD3O94806 890 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 SCGB1D2O95969 90 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 GRK2P25098 689 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 GRK3P35626 688 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 CLCN7P51798 805 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 GTF2A2P52657 109 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 LSAMPQ13449 338 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 MBLAC2Q68D91 279 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 CYP2R1Q6VVX0 501 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 PRR23CQ6ZRP0 262 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 C11orf74Q86VG3 221 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 CCAR1Q8IX12 1150 aaKnown RBP7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 CHPFQ8IZ52 775 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 FAM181AQ8N9Y4 354 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 PANK1Q8TE04 598 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 CHTF18Q8WVB6 975 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 CHAMP1Q96JM3 812 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 MENTQ9BUN1 341 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 METTL22Q9BUU2 404 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 PCGF6Q9BYE7 350 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 EMC7Q9NPA0 242 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 SPTLC3Q9NUV7 552 aa7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 TIMM13Q9Y5L4 95 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P3-201ENST00000502802 PTPDC1A2A3K4 754 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 FBXO21O94952 628 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 CEACAM5P06731 702 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 ATP2A2P16615 1042 aaKnown RBP7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 LTKP29376 864 aa7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 KPNA1P52294 538 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P3-201ENST00000502802 PIN1Q13526 163 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms