RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
AC055713.1-201ENST00000498967 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
AC055713.1-201ENST00000498967 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
AC055713.1-201ENST00000498967 ADGRL1O94910 1474 aa12.11□□□□□ -0.47
AC055713.1-201ENST00000498967 SLC12A1Q13621 1099 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 NBPF5PQ86XG9 351 aaPredicted RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 SERPINB1P30740 379 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 MSH2P43246 934 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 PDE6CP51160 858 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 LRRC8EQ6NSJ5 796 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 MAP3K15Q6ZN16 1313 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 RPRD2Q5VT52 1461 aaKnown RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 TRIM69Q86WT6 500 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 MED10Q9BTT4 135 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 STRIP2Q9ULQ0 834 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 ZSCAN9O15535 394 aaPredicted RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 KRT16P08779 473 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 YWHAGP61981 247 aaKnown RBP eCLIP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 THOC5Q13769 683 aaKnown RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 THOC7Q6I9Y2 204 aaKnown RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 TTC17Q96AE7 1141 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 ATP8A1Q9Y2Q0 1164 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 RWDD3Q9Y3V2 267 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 SOS2Q07890 1332 aaPredicted RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 TK2O00142 265 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 TFAP4Q01664 338 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 DRP2Q13474 957 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 TRIM67Q6ZTA4 783 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 Q6ZUG5 572 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 OLFM1Q99784 485 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 MYLK2Q9H1R3 596 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 EIF2B5Q13144 721 aaKnown RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 NHEJ1Q9H9Q4 299 aaPredicted RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 NSMCE4AQ9NXX6 385 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 ZNF148Q9UQR1 794 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 C16orf96A6NNT2 1141 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 CCNT1O60563 726 aaKnown RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 DNM1Q05193 864 aaKnown RBP12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 TBC1D32Q96NH3 1257 aa12.1□□□□□ -0.47
AC055713.1-201ENST00000498967 VGLL3A8MV65 326 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 ATXN3P54252 364 aaPredicted RBP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 BFSP2Q13515 415 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 TBC1D10BQ4KMP7 808 aaPredicted RBP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 GUCA1CO95843 209 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 KIRREL3Q8IZU9 778 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 VPS16Q9H269 839 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 AIPL1Q9NZN9 384 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 MYH9P35579 1960 aaKnown RBP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 RALGAPBQ86X10 1494 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 FAM133BQ5BKY9 247 aaKnown RBP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 PMS2P54278 862 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 WDR75Q8IWA0 830 aaKnown RBP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 SOX13Q9UN79 622 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 SNX21Q969T3 373 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 QKIQ96PU8 341 aaKnown RBP eCLIP12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 KCNK3O14649 394 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 KRT39Q6A163 491 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 SLC26A7Q8TE54 656 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 RSPH1Q8WYR4 309 aa12.09□□□□□ -0.47
AC055713.1-201ENST00000498967 RNF103-CHMP3A0A140T963 221 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 ASAP2O43150 1006 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 MAP3K13O43283 966 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 RWDD2BP57060 319 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 DNAAF3Q8N9W5 541 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 NLRP3Q96P20 1036 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 EYA3Q99504 573 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 CNGB3Q9NQW8 809 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 UVRAGQ9P2Y5 699 aa12.08□□□□□ -0.47
AC055713.1-201ENST00000498967 DEXIO95424 95 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 KIF19Q2TAC6 998 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 HERC4Q5GLZ8 1057 aaPredicted RBP12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 FRA10AC1Q70Z53 315 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 GINS2Q9Y248 185 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 TMOD1P28289 359 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 PSMC1P62191 440 aaKnown RBP12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 TAF1BQ53T94 588 aaPredicted RBP12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 OR8K1Q8NGG5 319 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 CCDC90BQ9GZT6 254 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 PHF8Q9UPP1 1060 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 ACAD11Q709F0 780 aa12.08□□□□□ -0.48
AC055713.1-201ENST00000498967 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms