RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ARHGEF39Q8N4T4 335 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 ZNF526Q8TF50 670 aaPredicted RBP5.46□□□□□ -1.54
VPS26A-208ENST00000497022 RCC1LQ96I51 464 aaKnown RBP5.46□□□□□ -1.54
VPS26A-208ENST00000497022 PTCHD1Q96NR3 888 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 MCMBPQ9BTE3 642 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 CAPN10Q9HC96 672 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 TBC1D8O95759 1140 aa5.45□□□□□ -1.54
VPS26A-208ENST00000497022 NCAM1P13591 858 aa5.45□□□□□ -1.54
VPS26A-208ENST00000497022 VPS37DQ86XT2 251 aa5.45□□□□□ -1.54
VPS26A-208ENST00000497022 ZNF513Q8N8E2 541 aaPredicted RBP5.45□□□□□ -1.54
VPS26A-208ENST00000497022 DDX1Q92499 740 aaKnown RBP5.45□□□□□ -1.54
VPS26A-208ENST00000497022 CGGBP1Q9UFW8 167 aaPredicted RBP5.45□□□□□ -1.54
VPS26A-208ENST00000497022 ANKRD34BA5PLL1 514 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 AURKAO14965 403 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 CORO7P57737 925 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 DPY19L1Q2PZI1 675 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 RCSD1Q6JBY9 416 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 B3GNT8Q7Z7M8 397 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 NLGN2Q8NFZ4 835 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 PDLIM7Q9NR12 457 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 SUGT1Q9Y2Z0 365 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 MRVI1Q9Y6F6 885 aa5.44□□□□□ -1.54
VPS26A-208ENST00000497022 A0A1W2PQJ5 194 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 L1CAMP32004 1257 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 GDF5P43026 501 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 HMGA2P52926 109 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 AMPD2Q01433 879 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 GRB10Q13322 594 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 EEF1DP3Q658K8 133 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 APBA2Q99767 749 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 NTMQ9P121 344 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 APEX2Q9UBZ4 518 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 AKT3Q9Y243 479 aa5.43□□□□□ -1.54
VPS26A-208ENST00000497022 C2orf71A6NGG8 1288 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 STXBP3O00186 592 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 SMAD7O15105 426 aaKnown RBP5.42□□□□□ -1.54
VPS26A-208ENST00000497022 PLATP00750 562 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS26A-208ENST00000497022 ASGR2P07307 311 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 C6P13671 934 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 TACR2P21452 398 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 SEPHS1P49903 392 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 ZNF143P52747 638 aaPredicted RBP5.42□□□□□ -1.54
VPS26A-208ENST00000497022 PRR5P85299 388 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 GNL2Q13823 731 aaKnown RBP5.42□□□□□ -1.54
VPS26A-208ENST00000497022 NCAPHQ15003 741 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 BICRALQ6AI39 1079 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 LOXL4Q96JB6 756 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 C8orf49Q96NF6 230 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 BACE2Q9Y5Z0 518 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 HCFC2Q9Y5Z7 792 aa5.42□□□□□ -1.54
VPS26A-208ENST00000497022 CYR61O00622 381 aa5.41□□□□□ -1.54
VPS26A-208ENST00000497022 ETFBP38117 255 aa5.41□□□□□ -1.54
VPS26A-208ENST00000497022 SARSP49591 514 aaKnown RBP5.41□□□□□ -1.54
VPS26A-208ENST00000497022 ZNF761Q86XN6 746 aaPredicted RBP5.41□□□□□ -1.54
VPS26A-208ENST00000497022 BVESQ8NE79 360 aa5.41□□□□□ -1.54
VPS26A-208ENST00000497022 DVL3Q92997 716 aaPredicted RBP5.41□□□□□ -1.54
VPS26A-208ENST00000497022 EMC9Q9Y3B6 208 aa5.41□□□□□ -1.54
VPS26A-208ENST00000497022 F8W031 263 aaPredicted RBP5.4□□□□□ -1.54
VPS26A-208ENST00000497022 KCNH1O95259 989 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 NAT2P11245 290 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 RBM25P49756 843 aaKnown RBP5.4□□□□□ -1.54
VPS26A-208ENST00000497022 TNNI3KQ59H18 835 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 POMZP3Q6PJE2 187 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 C6orf15Q6UXA7 325 aaPredicted RBP5.4□□□□□ -1.54
VPS26A-208ENST00000497022 CPNE8Q86YQ8 564 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 ALG3Q92685 438 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 TSPAN17Q96FV3 270 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.4□□□□□ -1.54
VPS26A-208ENST00000497022 TINF2Q9BSI4 451 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 MENTQ9BUN1 341 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 SCAND2PQ9GZW5 306 aaPredicted RBP5.4□□□□□ -1.54
VPS26A-208ENST00000497022 ACTR10Q9NZ32 417 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 PRKAG3Q9UGI9 489 aa5.4□□□□□ -1.54
VPS26A-208ENST00000497022 DBR1Q9UK59 544 aaKnown RBP5.4□□□□□ -1.54
VPS26A-208ENST00000497022 NOP56O00567 594 aaKnown RBP5.39□□□□□ -1.55
VPS26A-208ENST00000497022 FGRP09769 529 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 PAMP19021 973 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 TACR1P25103 407 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 MC3RP41968 323 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 ARID5AQ03989 594 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 TBC1D10BQ4KMP7 808 aaPredicted RBP5.39□□□□□ -1.55
VPS26A-208ENST00000497022 LARP1BQ659C4 914 aaKnown RBP5.39□□□□□ -1.55
VPS26A-208ENST00000497022 TTLL7Q6ZT98 887 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 CRACR2BQ8N4Y2 399 aaPredicted RBP5.39□□□□□ -1.55
VPS26A-208ENST00000497022 CPA5Q8WXQ8 436 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 COPS5Q92905 334 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 MRGPRX3Q96LB0 322 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 SLITRK6Q9H5Y7 841 aa5.39□□□□□ -1.55
VPS26A-208ENST00000497022 TRBV23OR9-2A0A075B6M9 112 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 NPHP3-ACAD11A0A0J9YXS1 232 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 PPP1R11O60927 126 aaPredicted RBP5.38□□□□□ -1.55
VPS26A-208ENST00000497022 GTF2IRD2BQ6EKJ0 949 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 GTF2IRD2Q86UP8 949 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 TRIM59Q8IWR1 403 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 FAM178BQ8IXR5 827 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 CHST13Q8NET6 341 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 PPP1R14AQ96A00 147 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 MRIQ9BWK5 157 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms