RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 RIOX1Q9H6W3 641 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 PNMA2Q9UL42 364 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 MRPL11Q9Y3B7 192 aaKnown RBP12.35□□□□□ -0.43
NELFE-213ENST00000494956 ELP1O95163 1332 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 RBM47A0AV96 593 aaKnown RBP12.34□□□□□ -0.43
NELFE-213ENST00000494956 DCDC2CA8MYV0 355 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 KIAA0355O15063 1070 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 MYL3P08590 195 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 RAG1P15918 1043 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 ITGA7Q13683 1181 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 LRIT3Q3SXY7 679 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 SEPT14Q6ZU15 432 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 FAM126BQ8IXS8 530 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 DNERQ8NFT8 737 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 OR6J1Q8NGC5 347 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 TOX2Q96NM4 488 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 PPP1R12CQ9BZL4 782 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 PCDHA1Q9Y5I3 950 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 UMODL1Q5DID0 1318 aa12.34□□□□□ -0.43
NELFE-213ENST00000494956 SH2B2O14492 632 aaPredicted RBP12.33□□□□□ -0.44
NELFE-213ENST00000494956 SORBS3O60504 671 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 PLEKHA8P1O95397 391 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 TXNP10599 105 aaKnown RBP12.33□□□□□ -0.44
NELFE-213ENST00000494956 HSD17B4P51659 736 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 SART3Q15020 963 aaKnown RBP12.33□□□□□ -0.44
NELFE-213ENST00000494956 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 LY6KQ17RY6 165 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 ADCK5Q3MIX3 580 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 CASC1Q6TDU7 716 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 CATIPQ7Z7H3 387 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 IL31RAQ8NI17 732 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 RMDN3Q96TC7 470 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 TBX21Q9UL17 535 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
NELFE-213ENST00000494956 DOCK5Q9H7D0 1870 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 hCG_1642624A0A1W2PR95 340 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 PURAQ00577 322 aaKnown RBP12.32□□□□□ -0.44
NELFE-213ENST00000494956 NFXL1Q6ZNB6 911 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 FCHSD1Q86WN1 690 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 MCF2L2Q86YR7 1114 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 SRBD1Q8N5C6 995 aaKnown RBP12.32□□□□□ -0.44
NELFE-213ENST00000494956 SLC43A3Q8NBI5 491 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 NSUN6Q8TEA1 469 aaKnown RBP12.32□□□□□ -0.44
NELFE-213ENST00000494956 SCFD2Q8WU76 684 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 TRPV6Q9H1D0 765 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 PXMP2Q9NR77 195 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 Q9Y3F1 56 aa12.32□□□□□ -0.44
NELFE-213ENST00000494956 SCN10AQ9Y5Y9 1956 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 PNMA6FA0A0J9YX94 578 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 ZEB2O60315 1214 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 B4GALT4O60513 344 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 CDC45O75419 566 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 RGS20O76081 388 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 TIMP1P01033 207 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 CD4P01730 458 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 NR3C2P08235 984 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 ACRP10323 421 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 MYCLP12524 364 aaPredicted RBP12.31□□□□□ -0.44
NELFE-213ENST00000494956 CPA1P15085 419 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 CYP2C18P33260 490 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 MCM5P33992 734 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
NELFE-213ENST00000494956 CCDC62Q6P9F0 684 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 DEFB123Q8N688 67 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 GPKOWQ92917 476 aaPredicted RBP eCLIP12.31□□□□□ -0.44
NELFE-213ENST00000494956 FAM161BQ96MY7 647 aa12.31□□□□□ -0.44
NELFE-213ENST00000494956 TRMT13Q9NUP7 481 aaKnown RBP12.31□□□□□ -0.44
NELFE-213ENST00000494956 SCN5AQ14524 2016 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 DDAH1O94760 285 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 CSF2RAP15509 400 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 FPGSQ05932 587 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 TTLL4Q14679 1199 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 PGM5Q15124 567 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 STXBP2Q15833 593 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 C16orf59Q7L2K0 433 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
NELFE-213ENST00000494956 AFG1LQ8WV93 481 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 TMEM87BQ96K49 555 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 MPHOSPH6Q99547 160 aaKnown RBP12.3□□□□□ -0.44
NELFE-213ENST00000494956 PDCD2LQ9BRP1 358 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 MROH7Q68CQ1 1323 aa12.3□□□□□ -0.44
NELFE-213ENST00000494956 B4DLN1 442 aa12.29□□□□□ -0.44
NELFE-213ENST00000494956 GCOM1H8Y6P7 765 aaPredicted RBP12.29□□□□□ -0.44
NELFE-213ENST00000494956 TLR3O15455 904 aaKnown RBP12.29□□□□□ -0.44
NELFE-213ENST00000494956 CABYRO75952 493 aa12.29□□□□□ -0.44
NELFE-213ENST00000494956 POLR2MP0CAP2 368 aa12.29□□□□□ -0.44
NELFE-213ENST00000494956 CYP2C9P11712 490 aa12.29□□□□□ -0.44
NELFE-213ENST00000494956 CPT1AP50416 773 aa12.29□□□□□ -0.44
NELFE-213ENST00000494956 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
NELFE-213ENST00000494956 CCL23P55773 120 aa12.29□□□□□ -0.44
NELFE-213ENST00000494956 GHRHRQ02643 423 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms