RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 PDLIM7Q9NR12 457 aa20.85■□□□□ 0.93
COL20A1-207ENST00000494913 TRIM43BA6NCK2 446 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 ZEB2O60315 1214 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 CXCL17Q6UXB2 119 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 RAB11FIP4Q86YS3 637 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 SCFD2Q8WU76 684 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 TRIM43Q96BQ3 446 aaPredicted RBP20.84■□□□□ 0.93
COL20A1-207ENST00000494913 IWS1Q96ST2 819 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 LZTS2Q9BRK4 669 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 SPZ1Q9BXG8 430 aa20.84■□□□□ 0.93
COL20A1-207ENST00000494913 LAMA3Q16787 3333 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 DCDC2CA8MYV0 355 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 CLTBP09497 229 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 CALM1P0DP23 149 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 CALM2P0DP24 149 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 CALM3P0DP25 149 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 EIF2AK2P19525 551 aaKnown RBP20.83■□□□□ 0.93
COL20A1-207ENST00000494913 HOXA13P31271 388 aaPredicted RBP20.83■□□□□ 0.93
COL20A1-207ENST00000494913 GNAQP50148 359 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 EXOSC10Q01780 885 aaKnown RBP20.83■□□□□ 0.93
COL20A1-207ENST00000494913 KRT32Q14532 448 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 PPP2R5BQ15173 497 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 DHX32Q7L7V1 743 aaKnown RBP20.83■□□□□ 0.93
COL20A1-207ENST00000494913 ANKRD33Q7Z3H0 272 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 RRP36Q96EU6 259 aaKnown RBP20.83■□□□□ 0.93
COL20A1-207ENST00000494913 TCEANC2Q96MN5 208 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 TOX2Q96NM4 488 aa20.83■□□□□ 0.93
COL20A1-207ENST00000494913 MAP3K20Q9NYL2 800 aaKnown RBP20.83■□□□□ 0.93
COL20A1-207ENST00000494913 A0A0U1RQG5 324 aaPredicted RBP20.82■□□□□ 0.92
COL20A1-207ENST00000494913 PLEKHA8P1O95397 391 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 TXNP10599 105 aaKnown RBP20.82■□□□□ 0.92
COL20A1-207ENST00000494913 SMARCA1P28370 1054 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 GHRHRQ02643 423 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 STXBP2Q15833 593 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 SEPT14Q6ZU15 432 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 SGMS1Q86VZ5 419 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 CMTR1Q8N1G2 835 aaKnown RBP20.82■□□□□ 0.92
COL20A1-207ENST00000494913 SRBD1Q8N5C6 995 aaKnown RBP20.82■□□□□ 0.92
COL20A1-207ENST00000494913 SAMD3Q8N6K7 520 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 PXMP2Q9NR77 195 aa20.82■□□□□ 0.92
COL20A1-207ENST00000494913 GCOM1H8Y6P7 765 aaPredicted RBP20.81■□□□□ 0.92
COL20A1-207ENST00000494913 ARVCFO00192 962 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 CABYRO75952 493 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 NR3C2P08235 984 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 POLR2MP0CAP2 368 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 CDK7P50613 346 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 FAAP100Q0VG06 881 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 TTLL4Q14679 1199 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 SYNE3Q6ZMZ3 975 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 TDHQ8IZJ6 230 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 FANCBQ8NB91 859 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 OR6J1Q8NGC5 347 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 BADQ92934 168 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 TMEM39AQ9NV64 488 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 SZT2Q5T011 3432 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 NKRFO15226 690 aaKnown RBP eCLIP20.81■□□□□ 0.92
COL20A1-207ENST00000494913 MICU3Q86XE3 530 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 CCDC82Q8N4S0 544 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 COPS5Q92905 334 aa20.81■□□□□ 0.92
COL20A1-207ENST00000494913 SEC63Q9UGP8 760 aaKnown RBP20.81■□□□□ 0.92
COL20A1-207ENST00000494913 MROH7Q68CQ1 1323 aa20.8■□□□□ 0.92
COL20A1-207ENST00000494913 REC8O95072 547 aa20.8■□□□□ 0.92
COL20A1-207ENST00000494913 ARIH2O95376 493 aa20.8■□□□□ 0.92
COL20A1-207ENST00000494913 CPT1AP50416 773 aa20.8■□□□□ 0.92
COL20A1-207ENST00000494913 FCHSD1Q86WN1 690 aa20.8■□□□□ 0.92
COL20A1-207ENST00000494913 KCNB2Q92953 911 aa20.8■□□□□ 0.92
COL20A1-207ENST00000494913 KIAA0355O15063 1070 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 EIF3JO75822 258 aaKnown RBP20.79■□□□□ 0.92
COL20A1-207ENST00000494913 HMGB1P09429 215 aaKnown RBP20.79■□□□□ 0.92
COL20A1-207ENST00000494913 MYCLP12524 364 aaPredicted RBP20.79■□□□□ 0.92
COL20A1-207ENST00000494913 RAG1P15918 1043 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 ITGB8P26012 769 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 HSPA4P34932 840 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 ITGA7Q13683 1181 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 CCDC62Q6P9F0 684 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 APOA5Q6Q788 366 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 PDCD2LQ9BRP1 358 aa20.79■□□□□ 0.92
COL20A1-207ENST00000494913 SOX1O00570 391 aaPredicted RBP20.78■□□□□ 0.92
COL20A1-207ENST00000494913 MYL3P08590 195 aa20.78■□□□□ 0.92
COL20A1-207ENST00000494913 PSMC6P62333 389 aa20.78■□□□□ 0.92
COL20A1-207ENST00000494913 LY6KQ17RY6 165 aa20.78■□□□□ 0.92
COL20A1-207ENST00000494913 BRDTQ58F21 947 aaPredicted RBP20.78■□□□□ 0.92
COL20A1-207ENST00000494913 POLR3EQ9NVU0 708 aa20.78■□□□□ 0.92
COL20A1-207ENST00000494913 BRPF3Q9ULD4 1205 aa20.78■□□□□ 0.92
COL20A1-207ENST00000494913 SNX14Q9Y5W7 946 aa20.78■□□□□ 0.92
COL20A1-207ENST00000494913 hCG_1642624A0A1W2PR95 340 aa20.77■□□□□ 0.92
COL20A1-207ENST00000494913 CPA1P15085 419 aa20.77■□□□□ 0.92
COL20A1-207ENST00000494913 FGD1P98174 961 aa20.77■□□□□ 0.92
COL20A1-207ENST00000494913 TMTC3Q6ZXV5 915 aa20.77■□□□□ 0.92
COL20A1-207ENST00000494913 SLC43A3Q8NBI5 491 aa20.77■□□□□ 0.92
COL20A1-207ENST00000494913 JAKMIP1Q96N16 626 aaKnown RBP20.77■□□□□ 0.92
COL20A1-207ENST00000494913 GRIN2DO15399 1336 aa20.77■□□□□ 0.92
COL20A1-207ENST00000494913 A6NJR5 290 aa20.76■□□□□ 0.91
COL20A1-207ENST00000494913 ZBTB43O43298 467 aa20.76■□□□□ 0.91
COL20A1-207ENST00000494913 PURAQ00577 322 aaKnown RBP20.76■□□□□ 0.91
COL20A1-207ENST00000494913 PGM5Q15124 567 aa20.76■□□□□ 0.91
COL20A1-207ENST00000494913 VSIG10LQ86VR7 867 aa20.76■□□□□ 0.91
COL20A1-207ENST00000494913 FAM126BQ8IXS8 530 aa20.76■□□□□ 0.91
COL20A1-207ENST00000494913 IL31RAQ8NI17 732 aa20.76■□□□□ 0.91
COL20A1-207ENST00000494913 TBX21Q9UL17 535 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms