RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 EMILIN1Q9Y6C2 1016 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SBNO1A3KN83 1393 aa4.44□□□□□ -1.7
ATG3-207ENST00000494571 SYNRGQ9UMZ2 1314 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 AKR1B15C9JRZ8 316 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 PPIP5K2O43314 1243 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 KRT16P08779 473 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 HSPA8P11142 646 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 NQO1P15559 274 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 KCNA2P16389 499 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ENDOUP21128 410 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 BDNFP23560 247 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 TMPOP42166 694 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 KIF11P52732 1056 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 MYL5Q02045 173 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 TBL3Q12788 808 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 SLC39A6Q13433 755 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 COL9A3Q14050 684 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 CNPY1Q3B7I2 92 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ZC2HC1CQ53FD0 456 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 SH2D4BQ5SQS7 431 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 BEND3Q5T5X7 828 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 CEP85Q6P2H3 762 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 RAB11FIP4Q86YS3 637 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ANKS4BQ8N8V4 417 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 CCDC197Q8NCU1 140 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 OR2W6PQ8NHA6 318 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ZSCAN31Q96LW9 406 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 PLEKHF1Q96S99 279 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PAGR1Q9BTK6 254 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 LRRC1Q9BTT6 524 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ESF1Q9H501 851 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 SH2B1Q9NRF2 756 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 EXOC1Q9NV70 894 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 INTS13Q9NVM9 706 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 RMND1Q9NWS8 449 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 CHPF2Q9P2E5 772 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 NKX1-2Q9UD57 310 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 MOSPD1Q9UJG1 213 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 SAR1BQ9Y6B6 198 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PZPP20742 1482 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 SHANK2Q9UPX8 1470 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 SETD1AO15047 1707 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 NOS1P29475 1434 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 A0A0J9YVX5 310 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 CCDC160A6NGH7 325 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ZNF233A6NK53 670 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ACTN4O43707 911 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 STK10O94804 968 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 TPPPO94811 219 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PENKP01210 267 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 LDHCP07864 332 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 CCDC166P0CW27 439 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 HOXB1P14653 301 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 PPP1R2P41236 205 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 NLRP12P59046 1061 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 GSTM4Q03013 218 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ITIH3Q06033 890 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PAK2Q13177 524 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PDE1CQ14123 709 aaPredicted RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATG3-207ENST00000494571 SOGA3Q5TF21 947 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PHLDB3Q6NSJ2 640 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PPP1R2P3Q6NXS1 205 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 OLFM4Q6UX06 510 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 NEK10Q6ZWH5 1172 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 RNF10Q8N5U6 811 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 ANKRD44Q8N8A2 993 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 PDCD7Q8N8D1 485 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 AENQ8WTP8 325 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 MRPS27Q92552 414 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 NACC2Q96BF6 587 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 NMD3Q96D46 503 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 MEIS3Q99687 375 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 CARD14Q9BXL6 1004 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 SYNCQ9H7C4 482 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ECT2Q9H8V3 914 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ATAD3AQ9NVI7 634 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ADAM22Q9P0K1 906 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 SSX2IPQ9Y2D8 614 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 GMEB1Q9Y692 573 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ASXL1Q8IXJ9 1541 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 NUP153P49790 1475 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 DNMT1P26358 1616 aaKnown RBP4.43□□□□□ -1.7
ATG3-207ENST00000494571 ADCY9O60503 1353 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 ABCC11Q96J66 1382 aa4.43□□□□□ -1.7
ATG3-207ENST00000494571 UBOX5O94941 541 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PDGFRBP09619 1106 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 VASPP50552 380 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 PMS2P54278 862 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ADARP55265 1226 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 PSMC1P62191 440 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 PDE4BQ07343 736 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 RBL2Q08999 1139 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 TUBB2AQ13885 445 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 BYSLQ13895 437 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 LBRQ14739 615 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 KRT72Q14CN4 511 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 IFI16Q16666 785 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 SH3D19Q5HYK7 790 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 KSR1Q8IVT5 923 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms