RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SASS6Q6UVJ0 657 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 LBX2Q6XYB7 198 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.7□□□□□ -1.18
MSH5-217ENST00000494458 CCDC84Q86UT8 332 aaPredicted RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 LDHDQ86WU2 507 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 KCTD17Q8N5Z5 321 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 TRIML1Q8N9V2 468 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 ETNPPLQ8TBG4 499 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 RBM46Q8TBY0 533 aaKnown RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 CLEC4DQ8WXI8 215 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 ZKSCAN4Q969J2 545 aaPredicted RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 DCPSQ96C86 337 aaKnown RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 PAGE5Q96GU1 130 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 WRNIP1Q96S55 665 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 SLF1Q9BQI6 1058 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 ANO3Q9BYT9 981 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 PANK2Q9BZ23 570 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 CUEDC2Q9H467 287 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 TAF1DQ9H5J8 278 aaPredicted RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 FBXO28Q9NVF7 368 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 KBTBD4Q9NVX7 518 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 ANO10Q9NW15 660 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 SERTAD1Q9UHV2 236 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 KCNH4Q9UQ05 1017 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 MRPL11Q9Y3B7 192 aaKnown RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 PCDHA5Q9Y5H7 936 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 SNCAIPQ9Y6H5 919 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 SCN4AP35499 1836 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 FRMPD4Q14CM0 1322 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 RPTORQ8N122 1335 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 RLFQ13129 1914 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 IGLV3-22A0A075B6J6 115 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 VWA5AO00534 786 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 CXCL11O14625 94 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 IRF6O14896 467 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 FOXN1O15353 648 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 SLC37A4O43826 429 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 CCNT1O60563 726 aaKnown RBP7.69□□□□□ -1.18
MSH5-217ENST00000494458 HOXA7P31268 230 aaPredicted RBP7.69□□□□□ -1.18
MSH5-217ENST00000494458 EPHX2P34913 555 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 ZNF165P49910 485 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 ARHGAP4P98171 946 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 PPATQ06203 517 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 SPIRE1Q08AE8 756 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 SPP2Q13103 211 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 MTMR2Q13614 643 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 MORC3Q14149 939 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 NCAPHQ15003 741 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 POSTNQ15063 836 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 LETM2Q2VYF4 491 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 ANO6Q4KMQ2 910 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 PRAMEF18Q5VWM3 479 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 SARM1Q6SZW1 724 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 B3GNT9Q6UX72 402 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 CATSPERGQ6ZRH7 1159 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 PNMA8AQ86V59 439 aaPredicted RBP7.69□□□□□ -1.18
MSH5-217ENST00000494458 IQUBQ8NA54 791 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 CNNM3Q8NE01 707 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 LRRC15Q8TF66 581 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 GSDMAQ96QA5 445 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 MAGEF1Q9HAY2 307 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 CBX8Q9HC52 389 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 DISC1Q9NRI5 854 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 ZHX2Q9Y6X8 837 aa7.69□□□□□ -1.18
MSH5-217ENST00000494458 UTRNP46939 3433 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 POLR2AP24928 1970 aaKnown RBP7.68□□□□□ -1.18
MSH5-217ENST00000494458 IQCA1LA6NCM1 817 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 MEIS1O00470 390 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 IKBKBO14920 756 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 AP5Z1O43299 807 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 TDP2O95551 362 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 BCRP11274 1271 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 SNAP25P60880 206 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 CCDC173Q0VFZ6 552 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 PNOCQ13519 176 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 MOGSQ13724 837 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 VGLL4Q14135 290 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 COG2Q14746 738 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 HS1BP3Q53T59 392 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 POTEEQ6S8J3 1075 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 C11orf57Q6ZUT1 292 aaPredicted RBP7.68□□□□□ -1.18
MSH5-217ENST00000494458 NIPA1Q7RTP0 329 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 SULF1Q8IWU6 871 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 DHX40Q8IX18 779 aaKnown RBP7.68□□□□□ -1.18
MSH5-217ENST00000494458 TBC1D5Q92609 795 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 KIFC2Q96AC6 838 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 FAM20AQ96MK3 541 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 DNAJC25Q9H1X3 360 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 HSD3B7Q9H2F3 369 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 RPAP3Q9H6T3 665 aaPredicted RBP7.68□□□□□ -1.18
MSH5-217ENST00000494458 DDX25Q9UHL0 483 aaKnown RBP7.68□□□□□ -1.18
MSH5-217ENST00000494458 HOOK1Q9UJC3 728 aaKnown RBP7.68□□□□□ -1.18
MSH5-217ENST00000494458 RABGAP1Q9Y3P9 1069 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 PARP14Q460N5 1801 aa7.68□□□□□ -1.18
MSH5-217ENST00000494458 A0A0G2JLL6 359 aaPredicted RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 SPDYE5A6NIY4 337 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 ADM5C9JUS6 153 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 FAM86B1E9PN63 330 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms