RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 DBHP09172 617 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 GLI4P10075 376 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 FPR2P25090 351 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
MSL3-217ENST00000494268 MESP2Q0VG99 397 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 RAB3GAP1Q15042 981 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 CEP68Q76N32 757 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 DCAF4Q8WV16 495 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 KISS1RQ969F8 398 aaPredicted RBP8.6□□□□□ -1.03
MSL3-217ENST00000494268 IPO9Q96P70 1041 aaKnown RBP8.6□□□□□ -1.03
MSL3-217ENST00000494268 EPB41L4BQ9H329 900 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
MSL3-217ENST00000494268 MRPS23Q9Y3D9 190 aaKnown RBP8.6□□□□□ -1.03
MSL3-217ENST00000494268 TRAF6Q9Y4K3 522 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 HCFC2Q9Y5Z7 792 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 PTCH2Q9Y6C5 1203 aa8.6□□□□□ -1.03
MSL3-217ENST00000494268 MYOCOSA0A1B0GUC4 107 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 ZC3H12DA2A288 527 aaKnown RBP8.59□□□□□ -1.03
MSL3-217ENST00000494268 C22orf46C9J442 243 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 RPTNQ6XPR3 784 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 NLRP10Q86W26 655 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 CHAMP1Q96JM3 812 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 SLC26A8Q96RN1 970 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 KRTAP4-8Q9BYQ9 185 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 GPR27Q9NS67 375 aa8.59□□□□□ -1.03
MSL3-217ENST00000494268 NTRK1P04629 796 aa8.58□□□□□ -1.04
MSL3-217ENST00000494268 C6orf222P0C671 652 aaPredicted RBP8.58□□□□□ -1.04
MSL3-217ENST00000494268 SUMO1P63165 101 aaKnown RBP8.58□□□□□ -1.04
MSL3-217ENST00000494268 YBX1P67809 324 aaKnown RBP8.58□□□□□ -1.04
MSL3-217ENST00000494268 LSAMPQ13449 338 aa8.58□□□□□ -1.04
MSL3-217ENST00000494268 SQSTM1Q13501 440 aa8.58□□□□□ -1.04
MSL3-217ENST00000494268 CBX2Q14781 532 aaPredicted RBP8.58□□□□□ -1.04
MSL3-217ENST00000494268 ZNF648Q5T619 568 aaPredicted RBP8.58□□□□□ -1.04
MSL3-217ENST00000494268 PAQR3Q6TCH7 311 aa8.58□□□□□ -1.04
MSL3-217ENST00000494268 SH3TC2Q8TF17 1288 aa8.58□□□□□ -1.04
MSL3-217ENST00000494268 MCOLN1Q9GZU1 580 aa8.58□□□□□ -1.04
MSL3-217ENST00000494268 SIT1Q9Y3P8 196 aa8.58□□□□□ -1.04
MSL3-217ENST00000494268 F8W031 263 aaPredicted RBP8.57□□□□□ -1.04
MSL3-217ENST00000494268 MYO1BO43795 1136 aa8.57□□□□□ -1.04
MSL3-217ENST00000494268 CYBBP04839 570 aa8.57□□□□□ -1.04
MSL3-217ENST00000494268 VIPR1P32241 457 aa8.57□□□□□ -1.04
MSL3-217ENST00000494268 STYK1Q6J9G0 422 aa8.57□□□□□ -1.04
MSL3-217ENST00000494268 ZSWIM2Q8NEG5 633 aa8.57□□□□□ -1.04
MSL3-217ENST00000494268 TRMT2BQ96GJ1 504 aaKnown RBP8.57□□□□□ -1.04
MSL3-217ENST00000494268 RNPC3Q96LT9 517 aaKnown RBP8.57□□□□□ -1.04
MSL3-217ENST00000494268 SGPP1Q9BX95 441 aa8.57□□□□□ -1.04
MSL3-217ENST00000494268 PPARGC1AQ9UBK2 798 aaKnown RBP8.57□□□□□ -1.04
MSL3-217ENST00000494268 SRGAP3O43295 1099 aa8.56□□□□□ -1.04
MSL3-217ENST00000494268 SRSF3P84103 164 aaKnown RBP8.56□□□□□ -1.04
MSL3-217ENST00000494268 ZC3H12BQ5HYM0 836 aaKnown RBP8.56□□□□□ -1.04
MSL3-217ENST00000494268 RSPO2Q6UXX9 243 aaPredicted RBP8.56□□□□□ -1.04
MSL3-217ENST00000494268 FBXO15Q8NCQ5 510 aaPredicted RBP8.56□□□□□ -1.04
MSL3-217ENST00000494268 TMEM169Q96HH4 297 aa8.56□□□□□ -1.04
MSL3-217ENST00000494268 CDIP1Q9H305 208 aa8.56□□□□□ -1.04
MSL3-217ENST00000494268 CLDND1Q9NY35 253 aa8.56□□□□□ -1.04
MSL3-217ENST00000494268 FARP2O94887 1054 aaPredicted RBP8.55□□□□□ -1.04
MSL3-217ENST00000494268 GTF2A2P52657 109 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 PRR5P85299 388 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 NR1I3Q14994 352 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 WWC2Q6AWC2 1192 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 TMEM132EQ6IEE7 984 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 LBX2Q6XYB7 198 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 SYDE1Q6ZW31 735 aaPredicted RBP8.55□□□□□ -1.04
MSL3-217ENST00000494268 CABP7Q86V35 215 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 POU5F2Q8N7G0 328 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 PTPRN2Q92932 1015 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 JAM3Q9BX67 310 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 DBR1Q9UK59 544 aaKnown RBP8.55□□□□□ -1.04
MSL3-217ENST00000494268 PLA2G2DQ9UNK4 145 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 X6R8D5 127 aa8.55□□□□□ -1.04
MSL3-217ENST00000494268 PEX10O60683 326 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 MAPKAPK2P49137 400 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 PLEKHN1Q494U1 663 aaPredicted RBP8.54□□□□□ -1.04
MSL3-217ENST00000494268 TMC6Q7Z403 805 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 IFNL3Q8IZI9 196 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 Q8N1Y9 231 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 KCNN1Q92952 543 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 FAM84AQ96KN4 292 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 BCAS3Q9H6U6 928 aa8.54□□□□□ -1.04
MSL3-217ENST00000494268 ESYT3A0FGR9 886 aa8.53□□□□□ -1.04
MSL3-217ENST00000494268 H7BY64 318 aa8.53□□□□□ -1.04
MSL3-217ENST00000494268 ABLIM1O14639 778 aa8.53□□□□□ -1.04
MSL3-217ENST00000494268 GPR85P60893 370 aa8.53□□□□□ -1.04
MSL3-217ENST00000494268 JAZF1Q86VZ6 243 aa8.53□□□□□ -1.04
MSL3-217ENST00000494268 ZFYVE21Q9BQ24 234 aa8.53□□□□□ -1.04
MSL3-217ENST00000494268 CNTD2Q9H8S5 307 aa8.53□□□□□ -1.04
MSL3-217ENST00000494268 MBD1Q9UIS9 605 aaPredicted RBP8.53□□□□□ -1.04
MSL3-217ENST00000494268 MRPL42Q9Y6G3 142 aaKnown RBP8.53□□□□□ -1.04
MSL3-217ENST00000494268 HRKO00198 91 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 ETV2O00321 342 aaPredicted RBP8.52□□□□□ -1.05
MSL3-217ENST00000494268 GABREP78334 506 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 ZC3H14Q6PJT7 736 aaKnown RBP8.52□□□□□ -1.05
MSL3-217ENST00000494268 NETO2Q8NC67 525 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 SLC7A14Q8TBB6 771 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 SIRT5Q9NXA8 310 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 NDOR1Q9UHB4 597 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 PCDHA9Q9Y5H5 950 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 PCDHA8Q9Y5H6 950 aa8.52□□□□□ -1.05
MSL3-217ENST00000494268 CCDC163A0A0D9SF12 145 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms