RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TFDP1Q14186 410 aa21.9■■□□□ 1.1
RNF40-203ENST00000493683 EXOC4Q96A65 974 aa21.9■■□□□ 1.1
RNF40-203ENST00000493683 DRC3Q9H069 523 aa21.9■■□□□ 1.1
RNF40-203ENST00000493683 LPXNO60711 386 aa21.89■■□□□ 1.1
RNF40-203ENST00000493683 CERKLQ49MI3 558 aaPredicted RBP21.89■■□□□ 1.1
RNF40-203ENST00000493683 ENOX1Q8TC92 643 aaKnown RBP21.89■■□□□ 1.1
RNF40-203ENST00000493683 RWDD2AQ9UIY3 292 aa21.89■■□□□ 1.1
RNF40-203ENST00000493683 A0A087WUV0 522 aaPredicted RBP21.89■■□□□ 1.1
RNF40-203ENST00000493683 SLFN14P0C7P3 912 aa21.89■■□□□ 1.1
RNF40-203ENST00000493683 EIF3BP55884 814 aaKnown RBP21.89■■□□□ 1.1
RNF40-203ENST00000493683 YWHAGP61981 247 aaKnown RBP eCLIP21.89■■□□□ 1.1
RNF40-203ENST00000493683 PABPC4Q13310 644 aaKnown RBP eCLIP21.89■■□□□ 1.13e-8■■■■□ 19.4
RNF40-203ENST00000493683 WHAMMQ8TF30 809 aa21.89■■□□□ 1.1
RNF40-203ENST00000493683 HSPA8P11142 646 aaKnown RBP21.89■■□□□ 1.09
RNF40-203ENST00000493683 KPNA2P52292 529 aaKnown RBP21.89■■□□□ 1.09
RNF40-203ENST00000493683 MMEL1Q495T6 779 aa21.89■■□□□ 1.09
RNF40-203ENST00000493683 RCOR1Q9UKL0 485 aa21.89■■□□□ 1.09
RNF40-203ENST00000493683 TMOD1P28289 359 aa21.89■■□□□ 1.09
RNF40-203ENST00000493683 SERPINB6P35237 376 aa21.89■■□□□ 1.09
RNF40-203ENST00000493683 PIK3CAP42336 1068 aa21.89■■□□□ 1.09
RNF40-203ENST00000493683 ZNF710Q8N1W2 664 aa21.89■■□□□ 1.09
RNF40-203ENST00000493683 THAP9Q9H5L6 903 aa21.89■■□□□ 1.09
RNF40-203ENST00000493683 HEXIM1O94992 359 aaKnown RBP21.88■■□□□ 1.09
RNF40-203ENST00000493683 HSPA2P54652 639 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 GTF2IP78347 998 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 ICA1Q05084 483 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 EXOC8Q8IYI6 725 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 AMNQ9BXJ7 453 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 FKBP3Q00688 224 aaKnown RBP21.88■■□□□ 1.09
RNF40-203ENST00000493683 PSMD2Q13200 908 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 PDE1CQ14123 709 aaPredicted RBP21.88■■□□□ 1.09
RNF40-203ENST00000493683 RASIP1Q5U651 963 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.88■■□□□ 1.09
RNF40-203ENST00000493683 H7C0C1 242 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 ECEL1O95672 775 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 ATP5OP48047 213 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 TXLNGQ9NUQ3 528 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 FAF1Q9UNN5 650 aaPredicted RBP21.88■■□□□ 1.09
RNF40-203ENST00000493683 RAB44Q7Z6P3 723 aaPredicted RBP21.88■■□□□ 1.09
RNF40-203ENST00000493683 PHKG2P15735 406 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 ODR4Q5SWX8 454 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 GPKOWQ92917 476 aaPredicted RBP eCLIP21.88■■□□□ 1.095e-7■■■■■ 43.5
RNF40-203ENST00000493683 PANX2Q96RD6 677 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 MMS19Q96T76 1030 aa21.88■■□□□ 1.09
RNF40-203ENST00000493683 PALM3A6NDB9 673 aaPredicted RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 STX1BP61266 288 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 RBL2Q08999 1139 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 SLFN13Q68D06 897 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 APOA5Q6Q788 366 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 TMTC3Q6ZXV5 915 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 NSUN7Q8NE18 718 aaKnown RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 FRMPD2Q68DX3 1309 aaPredicted RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 NR2F2P24468 414 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 ATP6V0A1Q93050 837 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 TRIM4Q9C037 500 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 TMEM206Q9H813 350 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 RRP15Q9Y3B9 282 aaKnown RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 DLATP10515 647 aaKnown RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 PDE1BQ01064 536 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 CMTR1Q8N1G2 835 aaKnown RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 WDR11Q9BZH6 1224 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 POLGP54098 1239 aaPredicted RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 ZBED6P86452 979 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 DMTNQ08495 405 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 SF3A3Q12874 501 aaKnown RBP eCLIP21.87■■□□□ 1.093e-6■■■■■ 31.7
RNF40-203ENST00000493683 EFHD1Q9BUP0 239 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 MRPL47Q9HD33 250 aaKnown RBP21.87■■□□□ 1.09
RNF40-203ENST00000493683 MAD1L1Q9Y6D9 718 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 ATP7AQ04656 1500 aa21.87■■□□□ 1.09
RNF40-203ENST00000493683 AATKQ6ZMQ8 1374 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 ALAS1P13196 640 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 BBS5Q8N3I7 341 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 METTL13Q8N6R0 699 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 SDR42E1Q8WUS8 393 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 ACCSQ96QU6 501 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 PDE8BO95263 885 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 S100BP04271 92 aaPredicted RBP21.86■■□□□ 1.09
RNF40-203ENST00000493683 BTDP43251 543 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 RASEFQ8IZ41 740 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 FBXO41Q8TF61 875 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 POMGNT1Q8WZA1 660 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 ZNF408Q9H9D4 720 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 CSADQ9Y600 493 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 CDC37Q16543 378 aaPredicted RBP21.86■■□□□ 1.09
RNF40-203ENST00000493683 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 MID2Q9UJV3 735 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 KIAA1024Q9UPX6 916 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 PCDHA1Q9Y5I3 950 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
RNF40-203ENST00000493683 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.86■■□□□ 1.09
RNF40-203ENST00000493683 ECM2O94769 699 aaPredicted RBP21.85■■□□□ 1.09
RNF40-203ENST00000493683 MESDQ14696 234 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 AP1ARQ63HQ0 302 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 EPB41L5Q9HCM4 733 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.85■■□□□ 1.091e-6■□□□□ 10.2
RNF40-203ENST00000493683 TTI1O43156 1089 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 ECE1P42892 770 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 NME8Q8N427 588 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 PPARDQ03181 441 aa21.85■■□□□ 1.09
RNF40-203ENST00000493683 IFT88Q13099 833 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms