RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 PNMA6AP0CW24 399 aaPredicted RBP14.37□□□□□ -0.11
PRAME-213ENST00000492657 PDE6BP35913 854 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 USP17L6PQ6QN14 398 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 SV2BQ7L1I2 683 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 SH3BP5LQ7L8J4 393 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 TMTC1Q8IUR5 882 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 TUBGCP2Q9BSJ2 902 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 FAM53CQ9NYF3 392 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 MAGEC2Q9UBF1 373 aaPredicted RBP14.37□□□□□ -0.11
PRAME-213ENST00000492657 RASSF10A6NK89 507 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 EEF2P13639 858 aaKnown RBP14.37□□□□□ -0.11
PRAME-213ENST00000492657 EEF1GP26641 437 aaKnown RBP14.37□□□□□ -0.11
PRAME-213ENST00000492657 PPP2R3AQ06190 1150 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
PRAME-213ENST00000492657 GLIS3Q8NEA6 775 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 FAM198AQ9UFP1 575 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 SCN9AQ15858 1988 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 TMCO3Q6UWJ1 677 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 CYP26C1Q6V0L0 522 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 C2CD5Q86YS7 1000 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 SNX29Q8TEQ0 813 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 HAS1Q92839 578 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 MAGEF1Q9HAY2 307 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 AGPAT5Q9NUQ2 364 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 ARGLU1Q9NWB6 273 aaPredicted RBP14.37□□□□□ -0.11
PRAME-213ENST00000492657 TRIM10Q9UDY6 481 aa14.37□□□□□ -0.11
PRAME-213ENST00000492657 REXO2Q9Y3B8 237 aaKnown RBP14.37□□□□□ -0.11
PRAME-213ENST00000492657 COL11A2P13942 1736 aaPredicted RBP14.36□□□□□ -0.11
PRAME-213ENST00000492657 ZBTB5O15062 677 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 TAL1P17542 331 aaPredicted RBP14.36□□□□□ -0.11
PRAME-213ENST00000492657 ERCC3P19447 782 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 CHRNA5P30532 468 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 ARHGAP25P42331 645 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.114e-8■□□□□ 9.7
PRAME-213ENST00000492657 TEX35Q5T0J7 233 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 SLC35F6Q8N357 371 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 CCDC47Q96A33 483 aaKnown RBP14.36□□□□□ -0.11
PRAME-213ENST00000492657 CDK5RAP3Q96JB5 506 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 CNOT6LQ96LI5 555 aaKnown RBP14.36□□□□□ -0.11
PRAME-213ENST00000492657 TMX4Q9H1E5 349 aaPredicted RBP14.36□□□□□ -0.11
PRAME-213ENST00000492657 PSTPIP2Q9H939 334 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 hCG_1984214I3L0E3 225 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 KIF5CO60282 957 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 IDEP14735 1019 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 CLK2P49760 499 aaKnown RBP14.36□□□□□ -0.11
PRAME-213ENST00000492657 AMPD3Q01432 767 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 RAD51AP2Q09MP3 1159 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 SEPT2Q15019 361 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 LRRC41Q15345 812 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 SIAH1Q8IUQ4 282 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 ZNF713Q8N859 430 aaPredicted RBP14.36□□□□□ -0.11
PRAME-213ENST00000492657 ZDHHC15Q96MV8 337 aa14.36□□□□□ -0.11
PRAME-213ENST00000492657 EFCAB8A8MWE9 144 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 GDF11O95390 407 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 MTIF2P46199 727 aaKnown RBP14.35□□□□□ -0.11
PRAME-213ENST00000492657 TBC1D8BQ0IIM8 1120 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 TMEM266Q2M3C6 531 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 OR8K1Q8NGG5 319 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 LARP4BQ92615 738 aaKnown RBP14.35□□□□□ -0.11
PRAME-213ENST00000492657 CUL5Q93034 780 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 DDX25Q9UHL0 483 aaKnown RBP14.35□□□□□ -0.11
PRAME-213ENST00000492657 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
PRAME-213ENST00000492657 TRIM66O15016 1216 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 TRIM14Q14142 442 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
PRAME-213ENST00000492657 DACT2Q5SW24 774 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 WDR59Q6PJI9 974 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 PODNQ7Z5L7 613 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 GPIHBP1Q8IV16 184 aa14.35□□□□□ -0.11
PRAME-213ENST00000492657 PUF60Q9UHX1 559 aaKnown RBP14.35□□□□□ -0.11
PRAME-213ENST00000492657 EPN1Q9Y6I3 576 aaPredicted RBP14.35□□□□□ -0.11
PRAME-213ENST00000492657 MARCH6O60337 910 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 ECE2O60344 883 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 CYP2C19P33261 490 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
PRAME-213ENST00000492657 JAG1P78504 1218 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 MIIPQ5JXC2 388 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 GPATCH4Q5T3I0 446 aaKnown RBP14.34□□□□□ -0.11
PRAME-213ENST00000492657 KRT79Q5XKE5 535 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 RAD54LQ92698 747 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 MTMR8Q96EF0 704 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 QSER1Q2KHR3 1735 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 NRXN2Q9P2S2 1712 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 SASH3O75995 380 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 SLC1A4P43007 532 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 DNM2P50570 870 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 SLFN13Q68D06 897 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 CNNM4Q6P4Q7 775 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 NOC4LQ9BVI4 516 aaKnown RBP14.34□□□□□ -0.11
PRAME-213ENST00000492657 LCMT1Q9UIC8 334 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 CAPN11Q9UMQ6 739 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 MYO3BQ8WXR4 1341 aa14.34□□□□□ -0.11
PRAME-213ENST00000492657 A0A1W2PQC6 194 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms