RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PRR5-ARHGAP8	B1AHC4	643 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	VAMP4	O75379	141 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	RB1	P06400	928 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	AR	P10275	920 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	AOC1	P19801	751 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	CPT1A	P50416	773 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	ARHGAP8	P85298	464 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	PTPN11	Q06124	597 aa	Predicted RBP	6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	PPM1J	Q5JR12	505 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	GORAB	Q5T7V8	394 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	CWF19L1	Q69YN2	538 aa	Known RBP	6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	ZC3H14	Q6PJT7	736 aa	Known RBP	6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	KIAA1211	Q6ZU35	1233 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	TMEM179	Q6ZVK1	233 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	RBM23	Q86U06	439 aa	Known RBP	6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	CLEC10A	Q8IUN9	316 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	CRIPAK	Q8N1N5	446 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	EFHB	Q8N7U6	833 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	FAM133A	Q8N9E0	248 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	RIN2	Q8WYP3	895 aa	Predicted RBP	6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	NEUROD6	Q96NK8	337 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	TSHZ2	Q9NRE2	1034 aa		6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	DDX49	Q9Y6V7	483 aa	Known RBP	6.55	□□□□□ -1.36
SEC13-219	ENST00000492602	FRYL	O94915	3013 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	C5orf67	F2Z3F1	127 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	LGR5	O75473	907 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	GLP2R	O95838	553 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	MMP1	P03956	469 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	POLR3D	P05423	398 aa	Predicted RBP	6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	CKB	P12277	381 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	BMPR1A	P36894	532 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	NRIP1	P48552	1158 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	ICA1	Q05084	483 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	CCDC184	Q52MB2	194 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	FAM83B	Q5T0W9	1011 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	TAPT1	Q6NXT6	567 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	ADGRD2	Q7Z7M1	963 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	SIAH1	Q8IUQ4	282 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	FIBCD1	Q8N539	461 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	DBF4B	Q8NFT6	615 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	SUSD6	Q92537	303 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	TOP1MT	Q969P6	601 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	NCDN	Q9UBB6	729 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	ANGPTL2	Q9UKU9	493 aa		6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	PA2G4	Q9UQ80	394 aa	Known RBP	6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.54	□□□□□ -1.36
SEC13-219	ENST00000492602		U3KPZ7	1027 aa	Predicted RBP	6.54	□□□□□ -1.36
SEC13-219	ENST00000492602	TRIP12	Q14669	1992 aa	Predicted RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	USP17L12	C9JPN9	530 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	USP17L21	D6R901	530 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	ZNF200	P98182	395 aa	Predicted RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	LMNB2	Q03252	620 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	CAMK1	Q14012	370 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	DUSP28	Q4G0W2	176 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	BRDT	Q58F21	947 aa	Predicted RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	GDF6	Q6KF10	455 aa	Predicted RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	GPR161	Q8N6U8	529 aa	Known RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	MIGA1	Q8NAN2	632 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	CHST13	Q8NET6	341 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	OR6J1	Q8NGC5	347 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	DHX38	Q92620	1227 aa	Known RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	CTAGE1	Q96RT6	745 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	SLF1	Q9BQI6	1058 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	RTP3	Q9BQQ7	232 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	IFIH1	Q9BYX4	1025 aa	Known RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	RAVER2	Q9HCJ3	691 aa	Known RBP	6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	HOMER2	Q9NSB8	354 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	FBXO40	Q9UH90	709 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	DACH1	Q9UI36	760 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	AKAP2	Q9Y2D5	859 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	COG6	Q9Y2V7	657 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	RWDD3	Q9Y3V2	267 aa		6.53	□□□□□ -1.36
SEC13-219	ENST00000492602	MAST4	O15021	2626 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	ZBED4	O75132	1171 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	PROS1	P07225	676 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	ASGR2	P07307	311 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	NPR3	P17342	541 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	CYP7A1	P22680	504 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	ARID4A	P29374	1257 aa	Predicted RBP	6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	RBM10	P98175	930 aa	Known RBP	6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	EVX2	Q03828	476 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	GABPA	Q06546	454 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	TFCP2	Q12800	502 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	MBTPS1	Q14703	1052 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	RALBP1	Q15311	655 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	VARS2	Q5ST30	1063 aa	Known RBP	6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	SUMF1	Q8NBK3	374 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	IL17RA	Q96F46	866 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	APOL5	Q9BWW9	433 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	WDR11	Q9BZH6	1224 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	USP44	Q9H0E7	712 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	GOPC	Q9HD26	462 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	SNRK	Q9NRH2	765 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	ZMIZ1	Q9ULJ6	1067 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	USP18	Q9UMW8	372 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	NR2E1	Q9Y466	385 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	PARP14	Q460N5	1801 aa		6.52	□□□□□ -1.37
SEC13-219	ENST00000492602	CACNA1F	O60840	1977 aa		6.51	□□□□□ -1.37
SEC13-219	ENST00000492602	FOCAD	Q5VW36	1801 aa		6.51	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms