RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-220ENST00000492280 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 LAD1O00515 517 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 SASH3O75995 380 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
HMGN1-220ENST00000492280 TBC1D8BQ0IIM8 1120 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 SEPT2Q15019 361 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 ASPRV1Q53RT3 343 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 CYP26C1Q6V0L0 522 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 KRT26Q7Z3Y9 468 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 ZFP91Q96JP5 570 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-220ENST00000492280 P2RX7Q99572 595 aaKnown RBP13.92□□□□□ -0.18
HMGN1-220ENST00000492280 NOC4LQ9BVI4 516 aaKnown RBP13.92□□□□□ -0.18
HMGN1-220ENST00000492280 LUC7L2Q9Y383 392 aaKnown RBP13.92□□□□□ -0.18
HMGN1-220ENST00000492280 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
HMGN1-220ENST00000492280 NRXN2Q9P2S2 1712 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 ARFGEF1Q9Y6D6 1849 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-220ENST00000492280 EFCAB8A8MWE9 144 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 SRGAP2O75044 1071 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 NDUFA10O95299 355 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 RHOXF2BP0C7M4 288 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 PNMA6AP0CW24 399 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-220ENST00000492280 SNHG28P0DPA3 235 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 CCNE1P24864 410 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 JAG1P78504 1218 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 APBA1Q02410 837 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 QRICH1Q2TAL8 776 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 KRT222Q8N1A0 295 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 HAS1Q92839 578 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 RHOXF2Q9BQY4 288 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 DDX25Q9UHL0 483 aaKnown RBP13.91□□□□□ -0.18
HMGN1-220ENST00000492280 MYH10P35580 1976 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 E9PMD0 336 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-220ENST00000492280 MIIPQ5JXC2 388 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 SV2BQ7L1I2 683 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 DDX12PQ92771 950 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 AK8Q96MA6 479 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 HINFPQ9BQA5 517 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 NAA15Q9BXJ9 866 aaKnown RBP13.91□□□□□ -0.18
HMGN1-220ENST00000492280 PARD6BQ9BYG5 372 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
HMGN1-220ENST00000492280 SCAF8Q9UPN6 1271 aaKnown RBP13.91□□□□□ -0.18
HMGN1-220ENST00000492280 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 POTECB2RU33 542 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 NOVP48745 357 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 HERVK_113P62684 666 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 TMTC1Q8IUR5 882 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 NELFCDQ8IXH7 590 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 SMCR8Q8TEV9 937 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-220ENST00000492280 EPN1Q9Y6I3 576 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-220ENST00000492280 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 PNMA6FA0A0J9YX94 578 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 NPR1P16066 1061 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 SLC1A4P43007 532 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 AOC3Q16853 763 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 TMCO3Q6UWJ1 677 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 C7orf25Q9BPX7 421 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 ZHX3Q9H4I2 956 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 THAP9Q9H5L6 903 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 BCAS3Q9H6U6 928 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 TDRD3Q9H7E2 651 aaKnown RBP13.9□□□□□ -0.18
HMGN1-220ENST00000492280 PSTPIP2Q9H939 334 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 FAM198AQ9UFP1 575 aa13.9□□□□□ -0.18
HMGN1-220ENST00000492280 EEF1GP26641 437 aaKnown RBP13.89□□□□□ -0.19
HMGN1-220ENST00000492280 TMEM266Q2M3C6 531 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 OR8K1Q8NGG5 319 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 CAPZA3Q96KX2 299 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 FAM170AA1A519 330 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 MACROD2A1Z1Q3 448 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 ZBTB5O15062 677 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 POLR3GO15318 223 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-220ENST00000492280 TUBB4AP04350 444 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 DMTNQ08495 405 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 RSRC2Q7L4I2 434 aaKnown RBP13.89□□□□□ -0.19
HMGN1-220ENST00000492280 NLGN1Q8N2Q7 840 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 CUL5Q93034 780 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 PNKPQ96T60 521 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 RIC8AQ9NPQ8 531 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 PCDHA1Q9Y5I3 950 aa13.89□□□□□ -0.19
HMGN1-220ENST00000492280 SLX4Q8IY92 1834 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 ESYT2A0FGR8 921 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 CTAGE9A4FU28 777 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 MEIS1O00470 390 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 ECE2O60344 883 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 HOXA13P31271 388 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-220ENST00000492280 PLA2G4AP47712 749 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-220ENST00000492280 KRT79Q5XKE5 535 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 NOA1Q8NC60 698 aaKnown RBP13.88□□□□□ -0.19
HMGN1-220ENST00000492280 RAD54LQ92698 747 aa13.88□□□□□ -0.19
HMGN1-220ENST00000492280 DRC1Q96MC2 740 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms