RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 BCAS3Q9H6U6 928 aa10.43□□□□□ -0.74
HDAC3-211ENST00000491581 SPC25Q9HBM1 224 aa10.43□□□□□ -0.74
HDAC3-211ENST00000491581 PRDM6Q9NQX0 595 aa10.43□□□□□ -0.74
HDAC3-211ENST00000491581 TELO2Q9Y4R8 837 aa10.43□□□□□ -0.74
HDAC3-211ENST00000491581 TRIP12Q14669 1992 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-211ENST00000491581 EIF2AK2P19525 551 aaKnown RBP10.42□□□□□ -0.74
HDAC3-211ENST00000491581 EDNRBP24530 442 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-211ENST00000491581 ANTXR2P58335 489 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 PURAQ00577 322 aaKnown RBP10.42□□□□□ -0.74
HDAC3-211ENST00000491581 PDE4DQ08499 809 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 DUSP28Q4G0W2 176 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 IQSEC1Q6DN90 963 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 GPR153Q6NV75 609 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 DGKHQ86XP1 1220 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 HOMER1Q86YM7 354 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 SYTL5Q8TDW5 730 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-211ENST00000491581 NOC4LQ9BVI4 516 aaKnown RBP10.42□□□□□ -0.74
HDAC3-211ENST00000491581 HIPK3Q9H422 1215 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 RNF41Q9H4P4 317 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-211ENST00000491581 VTA1Q9NP79 307 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 MAD2L2Q9UI95 211 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 SCN10AQ9Y5Y9 1956 aa10.42□□□□□ -0.74
HDAC3-211ENST00000491581 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 E7EWF7 191 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 CYTH3O43739 400 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 CFBP00751 764 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 PARP1P09874 1014 aaKnown RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 TXNP10599 105 aaKnown RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 RXRAP19793 462 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 DNAJB2P25686 324 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 HIC1Q14526 733 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 TCTN1Q2MV58 587 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 NBPF20Q3BBV1 942 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 FAM47CQ5HY64 1035 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 PPP4R3BQ5MIZ7 849 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 IFIT1BQ5T764 474 aaKnown RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 SPRED2Q7Z698 418 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 TMCO2Q7Z6W1 182 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 DEFB128Q7Z7B8 93 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 IQCA1Q86XH1 822 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 CMTR1Q8N1G2 835 aaKnown RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 AFG1LQ8WV93 481 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 ANKS1AQ92625 1134 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 PIGSQ96S52 555 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 PBX4Q9BYU1 374 aa10.41□□□□□ -0.74
HDAC3-211ENST00000491581 ALDH8A1Q9H2A2 487 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 YBX2Q9Y2T7 364 aaKnown RBP10.41□□□□□ -0.74
HDAC3-211ENST00000491581 WDR19Q8NEZ3 1342 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 KLRF2D3W0D1 207 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 ARHGEF15O94989 841 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 SMAD3P84022 425 aaKnown RBP10.4□□□□□ -0.74
HDAC3-211ENST00000491581 ARHGAP1Q07960 439 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 AAMPQ13685 434 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 TTLL4Q14679 1199 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 PPP2R5BQ15173 497 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 GPATCH4Q5T3I0 446 aaKnown RBP10.4□□□□□ -0.74
HDAC3-211ENST00000491581 RASIP1Q5U651 963 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 CCDC62Q6P9F0 684 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 FBXO11Q86XK2 927 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 PPM1EQ8WY54 764 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 CTAGE1Q96RT6 745 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 UBAC1Q9BSL1 405 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-211ENST00000491581 LRRC2Q9BYS8 371 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 NKX2-4Q9H2Z4 354 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 ADD3Q9UEY8 706 aaKnown RBP10.4□□□□□ -0.74
HDAC3-211ENST00000491581 TET1Q8NFU7 2136 aa10.4□□□□□ -0.74
HDAC3-211ENST00000491581 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 REV3LO60673 3130 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 PALM3A6NDB9 673 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 RFXAPO00287 272 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 HIP1O00291 1037 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 TLR3O15455 904 aaKnown RBP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 SGSM2O43147 1006 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 RGS20O76081 388 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 ZNF286BP0CG31 522 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 PCP11498 1178 aaKnown RBP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 MYCLP12524 364 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 ZNF200P98182 395 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 ASPRV1Q53RT3 343 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 KAT2BQ92831 832 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 WNT8BQ93098 351 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 RMDN3Q96TC7 470 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 OSBPL7Q9BZF2 842 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 KRT23Q9C075 422 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 PRDM12Q9H4Q4 367 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 CERS4Q9HA82 394 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 IL23AQ9NPF7 189 aa10.39□□□□□ -0.75
HDAC3-211ENST00000491581 RBM8AQ9Y5S9 174 aaKnown RBP10.39□□□□□ -0.75
HDAC3-211ENST00000491581 ABCB11O95342 1321 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 COL4A4P53420 1690 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-211ENST00000491581 PRUNE2Q8WUY3 3088 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 IFIT3O14879 490 aaKnown RBP10.38□□□□□ -0.75
HDAC3-211ENST00000491581 MMP3P08254 477 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 FOSL2P15408 326 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms