RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-204ENST00000486446 BRD1O95696 1058 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 ZKSCAN1P17029 563 aaPredicted RBP8.41□□□□□ -1.06
PUDP-204ENST00000486446 PSMA5P28066 241 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 GCLCP48506 637 aaPredicted RBP8.41□□□□□ -1.06
PUDP-204ENST00000486446 SMTNP53814 917 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 TLR1Q15399 786 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 LRRFIP1Q32MZ4 808 aaKnown RBP8.41□□□□□ -1.06
PUDP-204ENST00000486446 VPS53Q5VIR6 699 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 TRIM50Q86XT4 487 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 VWA5B2Q8N398 1253 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 SLC44A5Q8NCS7 719 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 SH3TC2Q8TF17 1288 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 APPBP2Q92624 585 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 DYNLL2Q96FJ2 89 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 ZSCAN31Q96LW9 406 aaPredicted RBP8.41□□□□□ -1.06
PUDP-204ENST00000486446 TTC14Q96N46 770 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 PPP1R9BQ96SB3 815 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 PUS7LQ9H0K6 701 aaKnown RBP8.41□□□□□ -1.06
PUDP-204ENST00000486446 SWAP70Q9UH65 585 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 ZDHHC9Q9Y397 364 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 CYP2D7A0A087X1C5 515 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 PALM3A6NDB9 673 aaPredicted RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 RNF113AO15541 343 aaKnown RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 ZFYP08048 801 aaPredicted RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 PRKCZQ05513 592 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 GABPAQ06546 454 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 SEPT2Q15019 361 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 MTFR1Q15390 333 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 FAM110CQ1W6H9 321 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 C4orf17Q53FE4 359 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 C12orf60Q5U649 245 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 CWC27Q6UX04 472 aaKnown RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 SV2AQ7L0J3 742 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 RHBDD1Q8TEB9 315 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 COA7Q96BR5 231 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 GMCL1Q96IK5 515 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 ZNF333Q96JL9 665 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 FSD1Q9BTV5 496 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 PPP1R12CQ9BZL4 782 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 BIN2Q9UBW5 565 aaPredicted RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 GABRQQ9UN88 632 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 LIMCH1Q9UPQ0 1083 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 MAFBQ9Y5Q3 323 aaPredicted RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 SNX14Q9Y5W7 946 aa8.4□□□□□ -1.06
PUDP-204ENST00000486446 BAZ2AQ9UIF9 1905 aaKnown RBP8.4□□□□□ -1.06
PUDP-204ENST00000486446 MYH8P13535 1937 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 APPP05067 770 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 HOXA7P31268 230 aaPredicted RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 GRK4P32298 578 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 FLT3LGP49771 235 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 USP14P54578 494 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 HERVK_113P62684 666 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 CLDN10P78369 228 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 INSM1Q01101 510 aaPredicted RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 KRT32Q14532 448 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 ANKRD1Q15327 319 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 GNASQ5JWF2 1037 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 TMEM179Q6ZVK1 233 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 GAS2L3Q86XJ1 694 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 CCAR1Q8IX12 1150 aaKnown RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 TRIM22Q8IYM9 498 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 ZNF295-AS1Q8N0V1 137 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 STK11IPQ8N1F8 1099 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 ACER1Q8TDN7 264 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 STRBPQ96SI9 672 aaKnown RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 P2RX7Q99572 595 aaKnown RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 PAGR1Q9BTK6 254 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 KIAA1683Q9H0B3 1180 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 SH2B1Q9NRF2 756 aaPredicted RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 HELLSQ9NRZ9 838 aa8.39□□□□□ -1.07
PUDP-204ENST00000486446 ARPP21Q9UBL0 812 aaPredicted RBP8.39□□□□□ -1.07
PUDP-204ENST00000486446 RBBP6Q7Z6E9 1792 aaKnown RBP8.38□□□□□ -1.07
PUDP-204ENST00000486446 CCDC171Q6TFL3 1326 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 MINDY4BA8MYZ0 360 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L15C9J2P7 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L13C9JLJ4 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L11C9JVI0 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L18D6R9N7 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 M0R2C6 588 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 CDK2AP1O14519 115 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 GPAA1O43292 621 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 ADCY3O60266 1144 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 MBD3O95983 291 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 F11P03951 625 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 AKR1B1P15121 316 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 GNAT2P19087 354 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 GUCY1A2P33402 732 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 TDO2P48775 406 aa8.38□□□□□ -1.07
PUDP-204ENST00000486446 CDK8P49336 464 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms