RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PRKAG2Q9UGJ0 569 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 Q9Y3F1 56 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 ELP1O95163 1332 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 A0A1W2PPC1 479 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 TRIM43BA6NCK2 446 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 PQBP1O60828 265 aaKnown RBP14.95□□□□□ -0.02
HDAC1-209ENST00000484305 PLEKHA8P1O95397 391 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 HOXA13P31271 388 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-209ENST00000484305 GHRHRQ02643 423 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 ERICH6BQ5W0A0 696 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 CXCL17Q6UXB2 119 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 DHX32Q7L7V1 743 aaKnown RBP14.95□□□□□ -0.02
HDAC1-209ENST00000484305 CMTR1Q8N1G2 835 aaKnown RBP14.95□□□□□ -0.02
HDAC1-209ENST00000484305 VTI1AQ96AJ9 217 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 TRIM43Q96BQ3 446 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-209ENST00000484305 SPZ1Q9BXG8 430 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 UBE2OQ9C0C9 1292 aaKnown RBP14.95□□□□□ -0.02
HDAC1-209ENST00000484305 SLC12A7Q9Y666 1083 aa14.95□□□□□ -0.02
HDAC1-209ENST00000484305 CENPBP07199 599 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-209ENST00000484305 CLTBP09497 229 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 CALM1P0DP23 149 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 CALM2P0DP24 149 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 CALM3P0DP25 149 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 EIF2AK2P19525 551 aaKnown RBP14.94□□□□□ -0.02
HDAC1-209ENST00000484305 SMARCA1P28370 1054 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 CDK7P50613 346 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 TRAF1Q13077 416 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 ARHGEF16Q5VV41 709 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 ANKRD33Q7Z3H0 272 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 SGMS1Q86VZ5 419 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
HDAC1-209ENST00000484305 SCFD2Q8WU76 684 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 COPS5Q92905 334 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 KCNB2Q92953 911 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 RRP36Q96EU6 259 aaKnown RBP14.94□□□□□ -0.02
HDAC1-209ENST00000484305 TOX2Q96NM4 488 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 IWS1Q96ST2 819 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 LBHD1Q9BQE6 289 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-209ENST00000484305 LZTS2Q9BRK4 669 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 PXMP2Q9NR77 195 aa14.94□□□□□ -0.02
HDAC1-209ENST00000484305 MAP3K20Q9NYL2 800 aaKnown RBP14.94□□□□□ -0.02
HDAC1-209ENST00000484305 A0A0U1RQG5 324 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-209ENST00000484305 DCDC2CA8MYV0 355 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 ARIH2O95376 493 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 NR3C2P08235 984 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 TXNP10599 105 aaKnown RBP14.93□□□□□ -0.02
HDAC1-209ENST00000484305 CPA1P15085 419 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 ITGB8P26012 769 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 HSPA4P34932 840 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 GNAQP50148 359 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 FAAP100Q0VG06 881 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 KRT32Q14532 448 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 PPP2R5BQ15173 497 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 STXBP2Q15833 593 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 APOA5Q6Q788 366 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 SEPT14Q6ZU15 432 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 MICU3Q86XE3 530 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 FANCBQ8NB91 859 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 BRPF3Q9ULD4 1205 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 MYH7BA7E2Y1 1941 aa14.93□□□□□ -0.02
HDAC1-209ENST00000484305 GCOM1H8Y6P7 765 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-209ENST00000484305 ARVCFO00192 962 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 SOX1O00570 391 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-209ENST00000484305 NKRFO15226 690 aaKnown RBP eCLIP14.92□□□□□ -0.02
HDAC1-209ENST00000484305 ZEB2O60315 1214 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 CABYRO75952 493 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 REC8O95072 547 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 POLR2MP0CAP2 368 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 PSMC6P62333 389 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 TTLL4Q14679 1199 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 CCDC62Q6P9F0 684 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 TDHQ8IZJ6 230 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 CCDC82Q8N4S0 544 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 SAMD3Q8N6K7 520 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 OR6J1Q8NGC5 347 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 BADQ92934 168 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 TMEM39AQ9NV64 488 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 GRIN2DO15399 1336 aa14.92□□□□□ -0.02
HDAC1-209ENST00000484305 hCG_1642624A0A1W2PR95 340 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 KIAA0355O15063 1070 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 EIF3JO75822 258 aaKnown RBP14.91□□□□□ -0.02
HDAC1-209ENST00000484305 HMGB1P09429 215 aaKnown RBP14.91□□□□□ -0.02
HDAC1-209ENST00000484305 MYCLP12524 364 aaPredicted RBP14.91□□□□□ -0.02
HDAC1-209ENST00000484305 PGM5Q15124 567 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 LY6KQ17RY6 165 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 SYNE3Q6ZMZ3 975 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 TMTC3Q6ZXV5 915 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 FCHSD1Q86WN1 690 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 SLC43A3Q8NBI5 491 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 IL31RAQ8NI17 732 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 JAKMIP1Q96N16 626 aaKnown RBP14.91□□□□□ -0.02
HDAC1-209ENST00000484305 PDCD2LQ9BRP1 358 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 SEC63Q9UGP8 760 aaKnown RBP14.91□□□□□ -0.02
HDAC1-209ENST00000484305 MROH7Q68CQ1 1323 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 LAMA3Q16787 3333 aa14.91□□□□□ -0.02
HDAC1-209ENST00000484305 RGS20O76081 388 aa14.9□□□□□ -0.02
HDAC1-209ENST00000484305 MYL3P08590 195 aa14.9□□□□□ -0.02
HDAC1-209ENST00000484305 CPT1AP50416 773 aa14.9□□□□□ -0.02
HDAC1-209ENST00000484305 PURAQ00577 322 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms